Mouse (GRCm39)
Description

ATPase, Ca++-sequestering [Source:MGI Symbol;Acc:MGI:1889008]

Gene Synonyms

1700121J11Rik, ATP2C1A, D930003G21Rik, PMR1, SPCA

About this transcript

This transcript has 28 exons, is annotated with 43 domains and features, is associated with 4688 variant alleles and maps to 436 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000085133.13Atp2c1-2024665952aaENSMUSP00000082220.7
 
Protein coding
CCDS57698Q3UZR5 Ensembl CanonicalGENCODE basicTSL:1
ENSMUST00000112558.10Atp2c1-2045642918aaENSMUSP00000108177.3
 
Protein coding
CCDS40752Q80XR2 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000038118.15Atp2c1-2014876918aaENSMUSP00000039103.8
 
Protein coding
CCDS40752Q80XR2 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000176770.8Atp2c1-2122781926aaENSMUSP00000134764.2
 
Protein coding
H3BIX7 GENCODE basicTSL:5
ENSMUST00000177074.8Atp2c1-2162664887aaENSMUSP00000135646.2
 
Protein coding
H3BL44 GENCODE basicTSL:5
ENSMUST00000163879.9Atp2c1-2052408669aaENSMUSP00000129617.3
 
Protein coding
CCDS57697Q8BMS7 GENCODE basicTSL:1
ENSMUST00000176363.9Atp2c1-2091082230aaENSMUSP00000135170.2
 
Protein coding
H3BJY0 TSL:5CDS 3' incomplete
ENSMUST00000176651.8Atp2c1-210899253aaENSMUSP00000135732.2
 
Protein coding
H3BLC2 TSL:5CDS 3' incomplete
ENSMUST00000176190.8Atp2c1-208823208aaENSMUSP00000135320.2
 
Protein coding
H3BKB1 TSL:5CDS 3' incomplete
ENSMUST00000176036.8Atp2c1-207710177aaENSMUSP00000135010.2
 
Protein coding
H3BJJ5 TSL:5CDS 3' incomplete
ENSMUST00000177334.2Atp2c1-219578111aaENSMUSP00000134902.2
 
Protein coding
H3BJ99 TSL:5CDS 3' incomplete
ENSMUST00000177293.8Atp2c1-2182476786aaENSMUSP00000135802.2
 
Nonsense mediated decay
H3BLI6 TSL:5CDS 5' incomplete
ENSMUST00000112557.9Atp2c1-2031514No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000176960.8Atp2c1-2141072No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000190802.2Atp2c1-221833No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000176787.2Atp2c1-2131449No protein-
 
Retained intron
-TSL:1
ENSMUST00000186495.2Atp2c1-2201413No protein-
 
Retained intron
-TSL:NA
ENSMUST00000177189.8Atp2c1-217939No protein-
 
Retained intron
-TSL:1
ENSMUST00000176656.2Atp2c1-211691No protein-
 
Retained intron
-TSL:3
ENSMUST00000177000.2Atp2c1-215642No protein-
 
Retained intron
-TSL:3
ENSMUST00000175697.2Atp2c1-206255No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 28, Coding exons: 27, Transcript length: 4,876 bps, Translation length: 918 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q80XR2

CCDS

This transcript is a member of the Mouse CCDS set: CCDS40752

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000038118.15

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.