Mouse (GRCm39)
Description

ATRX, chromatin remodeler [Source:MGI Symbol;Acc:MGI:103067]

Gene Synonyms

4833408C14Rik, DXHXS6677E, HP1-BP38, Hp1bp2, Rad54, XH2, Xnp, alpha thalassemia/mental retardation syndrome X-linked

About this transcript

This transcript has 35 exons, is annotated with 85 domains and features, is associated with 7854 variant alleles and maps to 602 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000113573.8Atrx-202102752476aaENSMUSP00000109203.2
 
Protein coding
CCDS41095Q61687 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000128968.8Atrx-2063233995aaENSMUSP00000121416.3
 
Protein coding
F6RDB7 TSL:5CDS 3' incomplete
ENSMUST00000200471.2Atrx-2273124334aaENSMUSP00000143280.2
 
Protein coding
A0A0G2JFR8 TSL:3CDS 5' incomplete
ENSMUST00000101305.9Atrx-2012903181aaENSMUSP00000098863.3
 
Protein coding
Q3TA30 GENCODE basicTSL:1
ENSMUST00000150914.8Atrx-2171920385aaENSMUSP00000122034.2
 
Protein coding
Q8C2S3 TSL:1CDS 3' incomplete
ENSMUST00000198448.5Atrx-2241835520aaENSMUSP00000143090.2
 
Protein coding
A0A0G2JFA5 TSL:5CDS 3' incomplete
ENSMUST00000134507.8Atrx-2101716347aaENSMUSP00000123085.2
 
Protein coding
Q3UY26 TSL:1CDS 3' incomplete
ENSMUST00000198209.2Atrx-2221579526aaENSMUSP00000142726.2
 
Protein coding
A0A0G2JED2 TSL:5CDS 5' and 3' incomplete
ENSMUST00000134381.8Atrx-2091155238aaENSMUSP00000122875.3
 
Protein coding
A6PWK8 TSL:3CDS 3' incomplete
ENSMUST00000154866.8Atrx-218916208aaENSMUSP00000121291.2
 
Protein coding
A6PWK7 TSL:5CDS 3' incomplete
ENSMUST00000199233.5Atrx-226754158aaENSMUSP00000143015.2
 
Protein coding
A0A0G2JF42 TSL:5CDS 3' incomplete
ENSMUST00000130980.2Atrx-20772061aaENSMUSP00000117528.2
 
Protein coding
A6PWL2 TSL:5CDS 3' incomplete
ENSMUST00000137453.8Atrx-21164489aaENSMUSP00000120246.2
 
Protein coding
A6PWK9 TSL:3CDS 3' incomplete
ENSMUST00000198441.5Atrx-223642174aaENSMUSP00000143565.2
 
Protein coding
A0A0G2JGH3 TSL:5CDS 3' incomplete
ENSMUST00000127221.8Atrx-20566212aaENSMUSP00000143664.2
 
Nonsense mediated decay
A0A0G2JGR1 TSL:3CDS 5' incomplete
ENSMUST00000198567.2Atrx-22566078aaENSMUSP00000143007.2
 
Nonsense mediated decay
A0A0G2JF35 TSL:3CDS 5' incomplete
ENSMUST00000197302.5Atrx-221490135aaENSMUSP00000143163.2
 
Nonsense mediated decay
A0A0G2JFG6 TSL:5CDS 5' incomplete
ENSMUST00000141609.2Atrx-213735No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000126345.3Atrx-204520No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000196998.2Atrx-2205431No protein-
 
Retained intron
-TSL:NA
ENSMUST00000123174.2Atrx-2031838No protein-
 
Retained intron
-TSL:1
ENSMUST00000155445.6Atrx-219942No protein-
 
Retained intron
-TSL:3
ENSMUST00000142235.2Atrx-214771No protein-
 
Retained intron
-TSL:3
ENSMUST00000143361.2Atrx-215743No protein-
 
Retained intron
-TSL:2
ENSMUST00000146193.3Atrx-216691No protein-
 
Retained intron
-TSL:3
ENSMUST00000133543.2Atrx-208545No protein-
 
Retained intron
-TSL:3
ENSMUST00000138765.2Atrx-212468No protein-
 
Retained intron
-TSL:5
Statistics

Exons: 35, Coding exons: 35, Transcript length: 10,275 bps, Translation length: 2,476 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q61687

CCDS

This transcript is a member of the Mouse CCDS set: CCDS41095

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000113573.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.