Mouse (GRCm39)
Description

ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) [Source:MGI Symbol;Acc:MGI:107537]

Gene Synonyms

battenin

About this transcript

This transcript has 10 exons, is annotated with 16 domains and features, is associated with 800 variant alleles and maps to 111 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000084589.11Cln3-2023203438aaENSMUSP00000081636.5
 
Protein coding
CCDS21833Q61124 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000116269.9Cln3-2042487438aaENSMUSP00000111973.3
 
Protein coding
CCDS21833Q61124 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000032962.11Cln3-2012386438aaENSMUSP00000032962.5
 
Protein coding
CCDS21833Q61124 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000098036.9Cln3-2031571414aaENSMUSP00000095644.3
 
Protein coding
Q6PAH4 GENCODE basicTSL:1
ENSMUST00000128970.8Cln3-209834195aaENSMUSP00000114901.2
 
Protein coding
D3YUU4 TSL:3CDS 3' incomplete
ENSMUST00000125508.8Cln3-206725151aaENSMUSP00000117561.2
 
Protein coding
D3Z448 TSL:5CDS 3' incomplete
ENSMUST00000150311.8Cln3-21659469aaENSMUSP00000116160.2
 
Protein coding
D3Z6L5 TSL:5CDS 3' incomplete
ENSMUST00000150587.8Cln3-21752570aaENSMUSP00000118054.2
 
Protein coding
D3YZN0 TSL:2CDS 3' incomplete
ENSMUST00000147086.2Cln3-21546051aaENSMUSP00000114555.2
 
Protein coding
D3YVA8 TSL:2CDS 3' incomplete
ENSMUST00000150917.8Cln3-21877177aaENSMUSP00000138688.2
 
Nonsense mediated decay
S4R2L1 TSL:5
ENSMUST00000128225.8Cln3-208977No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000134498.2Cln3-212809No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000139766.2Cln3-214537No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000138285.8Cln3-213527No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000128049.2Cln3-207414No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000153790.8Cln3-2191821No protein-
 
Retained intron
-TSL:1
ENSMUST00000134406.2Cln3-211913No protein-
 
Retained intron
-TSL:3
ENSMUST00000124177.2Cln3-205812No protein-
 
Retained intron
-TSL:5
ENSMUST00000134246.8Cln3-210506No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 10, Coding exons: 8, Transcript length: 834 bps, Translation length: 195 residues

Transcript Support Level (TSL)

TSL:3

Incomplete CDS

CDS 3' incomplete

Version

ENSMUST00000128970.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.