Mouse (GRCm39)
Description

caldesmon 1 [Source:MGI Symbol;Acc:MGI:88250]

Gene Synonyms

4833423D12Rik, C920027I18Rik

Location
About this transcript

This transcript has 13 exons, is annotated with 30 domains and features, is associated with 3444 variant alleles and maps to 253 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000115027.8Cald1-2054777768aaENSMUSP00000110679.2
 
Protein coding
E9QA15 Ensembl CanonicalGENCODE basicTSL:5
ENSMUST00000079391.10Cald1-2024127534aaENSMUSP00000078362.4
 
Protein coding
E9Q0M9 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000115026.8Cald1-2044080536aaENSMUSP00000110678.2
 
Protein coding
CCDS85029E9QA16 GENCODE basicAPPRIS P3TSL:5
ENSMUST00000115021.8Cald1-2034041530aaENSMUSP00000110673.2
 
Protein coding
CCDS39456Q8VCQ8 GENCODE basicTSL:1
ENSMUST00000031775.13Cald1-2012142554aaENSMUSP00000031775.7
 
Protein coding
D3Z6I7 GENCODE basicTSL:5
ENSMUST00000136907.8Cald1-2101063354aaENSMUSP00000121213.2
 
Protein coding
F6T2Z7 TSL:1CDS 5' and 3' incomplete
ENSMUST00000142512.8Cald1-211956253aaENSMUSP00000122926.2
 
Protein coding
E9Q9F3 TSL:3CDS 3' incomplete
ENSMUST00000142716.3Cald1-212821274aaENSMUSP00000116247.2
 
Protein coding
F6QLP8 TSL:5CDS 5' and 3' incomplete
ENSMUST00000123823.8Cald1-206633211aaENSMUSP00000117064.2
 
Protein coding
F6ZAW1 TSL:3CDS 5' and 3' incomplete
ENSMUST00000126181.8Cald1-207413137aaENSMUSP00000121911.2
 
Protein coding
F6RGN9 TSL:5CDS 5' and 3' incomplete
ENSMUST00000149009.8Cald1-2144096534aaENSMUSP00000138368.2
 
Nonsense mediated decay
S4R1T7 TSL:5
ENSMUST00000201956.2Cald1-2183972No protein-
 
Retained intron
-TSL:NA
ENSMUST00000155714.8Cald1-2161422No protein-
 
Retained intron
-TSL:1
ENSMUST00000201024.2Cald1-2171264No protein-
 
Retained intron
-TSL:NA
ENSMUST00000154182.8Cald1-215743No protein-
 
Retained intron
-TSL:1
ENSMUST00000132331.2Cald1-209674No protein-
 
Retained intron
-TSL:2
ENSMUST00000127055.2Cald1-208667No protein-
 
Retained intron
-TSL:2
ENSMUST00000146685.2Cald1-213262No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,142 bps, Translation length: 554 residues

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000031775.13

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.