Mouse (GRCm39)
Description

PAN3 poly(A) specific ribonuclease subunit [Source:MGI Symbol;Acc:MGI:1919837]

Gene Synonyms

2700050F09Rik, A430027N15Rik

About this transcript

This transcript has 9 exons, is associated with 5258 variant alleles and maps to 112 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000176600.8Pan3-2095541887aaENSMUSP00000135367.2
 
Protein coding
H3BKF3 Ensembl CanonicalGENCODE basicAPPRIS P2TSL:5
ENSMUST00000031651.15Pan3-2015048837aaENSMUSP00000031651.9
 
Protein coding
CCDS39401Q640Q5 GENCODE basicAPPRIS ALT2TSL:5
ENSMUST00000175807.8Pan3-2023486458aaENSMUSP00000135729.2
 
Protein coding
H3BLB9 TSL:5CDS 5' incomplete
ENSMUST00000176753.8Pan3-2102264688aaENSMUSP00000134989.2
 
Protein coding
H3BJH6 TSL:5CDS 5' incomplete
ENSMUST00000176553.2Pan3-207716205aaENSMUSP00000134911.2
 
Protein coding
H3BJA8 TSL:3CDS 5' incomplete
ENSMUST00000200885.4Pan3-218468156aaENSMUSP00000144495.2
 
Protein coding
A0A0J9YV55 TSL:3CDS 5' and 3' incomplete
ENSMUST00000176596.8Pan3-2084152105aaENSMUSP00000135477.2
 
Nonsense mediated decay
H3BKQ1 TSL:1CDS 5' incomplete
ENSMUST00000177465.8Pan3-2162544210aaENSMUSP00000134810.2
 
Nonsense mediated decay
H3BJ17 TSL:5CDS 5' incomplete
ENSMUST00000176466.8Pan3-2051049183aaENSMUSP00000135673.2
 
Nonsense mediated decay
H3BL68 TSL:5CDS 5' incomplete
ENSMUST00000176856.2Pan3-213468No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000202884.4Pan3-223451No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000176817.2Pan3-212322No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000176357.2Pan3-204305No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000201248.2Pan3-2193749No protein-
 
Retained intron
-TSL:NA
ENSMUST00000176505.8Pan3-2063207No protein-
 
Retained intron
-TSL:1
ENSMUST00000201799.2Pan3-2202366No protein-
 
Retained intron
-TSL:NA
ENSMUST00000202559.2Pan3-2211899No protein-
 
Retained intron
-TSL:NA
ENSMUST00000177328.3Pan3-215792No protein-
 
Retained intron
-TSL:3
ENSMUST00000176806.2Pan3-211712No protein-
 
Retained intron
-TSL:2
ENSMUST00000202732.2Pan3-222671No protein-
 
Retained intron
-TSL:2
ENSMUST00000177327.8Pan3-214600No protein-
 
Retained intron
-TSL:3
ENSMUST00000176202.8Pan3-203522No protein-
 
Retained intron
-TSL:2
ENSMUST00000177496.8Pan3-217468No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 9, Coding exons: 5, Transcript length: 1,049 bps, Translation length: 183 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 5' incomplete

Version

ENSMUST00000176466.8

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]