Mouse (GRCm39)
Description

lysine (K)-specific demethylase 2B [Source:MGI Symbol;Acc:MGI:1354737]

Gene Synonyms

Cxxc2, Fbxl10, Jhdm1b

About this transcript

This transcript has 12 exons, is annotated with 32 domains and features, is associated with 1864 variant alleles and maps to 272 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000046073.16Kdm2b-20251801309aaENSMUSP00000038229.10
 
Protein coding
CCDS39259Q6P1G2 Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENSMUST00000118027.8Kdm2b-20450621266aaENSMUSP00000114052.3
 
Protein coding
D3YVU4 GENCODE basicTSL:5
ENSMUST00000086200.11Kdm2b-20349991303aaENSMUSP00000083376.5
 
Protein coding
E9QL25 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000121739.8Kdm2b-20541071254aaENSMUSP00000114049.2
 
Protein coding
D3YVU7 GENCODE basicTSL:5
ENSMUST00000031435.14Kdm2b-2013532776aaENSMUSP00000031435.8
 
Protein coding
CCDS19657Q6P1G2-2 GENCODE basicTSL:1
ENSMUST00000156474.8Kdm2b-2181598514aaENSMUSP00000118488.2
 
Protein coding
D3YUE3 TSL:1CDS 3' incomplete
ENSMUST00000145082.2Kdm2b-2141043286aaENSMUSP00000114731.2
 
Protein coding
D3YV31 TSL:2CDS 3' incomplete
ENSMUST00000152872.2Kdm2b-217888296aaENSMUSP00000119746.2
 
Protein coding
F6QTG9 TSL:3CDS 5' and 3' incomplete
ENSMUST00000127403.8Kdm2b-207254338aaENSMUSP00000120912.2
 
Nonsense mediated decay
D6RHM8 TSL:5
ENSMUST00000143273.8Kdm2b-213724No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000150543.2Kdm2b-216697No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000147544.8Kdm2b-215625No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000129998.8Kdm2b-208550No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000173355.8Kdm2b-219516No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000138929.8Kdm2b-211464No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000139674.2Kdm2b-2124244No protein-
 
Retained intron
-TSL:1
ENSMUST00000123479.8Kdm2b-2062753No protein-
 
Retained intron
-TSL:1
ENSMUST00000134501.8Kdm2b-2101491No protein-
 
Retained intron
-TSL:1
ENSMUST00000132419.2Kdm2b-209641No protein-
 
Retained intron
-TSL:2
ENSMUST00000174357.2Kdm2b-220414No protein-
 
Retained intron
-TSL:5
Statistics

Exons: 12, Coding exons: 12, Transcript length: 3,532 bps, Translation length: 776 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6P1G2

CCDS

This transcript is a member of the Mouse CCDS set: CCDS19657

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000031435.14

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.