Mouse (GRCm39)
Description

sorting nexin 17 [Source:MGI Symbol;Acc:MGI:2387801]

Gene Synonyms

5830447M19Rik, D5Ertd260e, b2b1625.1Clo

Location
About this transcript

This transcript has 15 exons, is annotated with 18 domains and features, is associated with 731 variant alleles and maps to 258 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000031029.15Snx17-2012018470aaENSMUSP00000031029.9
 
Protein coding
CCDS19177Q8BVL3 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000201535.4Snx17-204765169aaENSMUSP00000144643.2
 
Protein coding
D3Z7S9 TSL:3CDS 3' incomplete
ENSMUST00000201679.4Snx17-20536267aaENSMUSP00000144688.2
 
Protein coding
D3Z3J1 TSL:5CDS 3' incomplete
ENSMUST00000200730.4Snx17-202201987aaENSMUSP00000144504.2
 
Nonsense mediated decay
H3BKG9 TSL:5
ENSMUST00000202124.4Snx17-208164766aaENSMUSP00000144168.2
 
Nonsense mediated decay
H3BKQ6 TSL:5
ENSMUST00000201343.2Snx17-203764No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000202323.4Snx17-2102332No protein-
 
Retained intron
-TSL:1
ENSMUST00000202032.4Snx17-2072111No protein-
 
Retained intron
-TSL:5
ENSMUST00000201835.4Snx17-206786No protein-
 
Retained intron
-TSL:3
ENSMUST00000202743.4Snx17-211731No protein-
 
Retained intron
-TSL:3
ENSMUST00000202318.4Snx17-209641No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,018 bps, Translation length: 470 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BVL3

CCDS

This transcript is a member of the Mouse CCDS set: CCDS19177

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000031029.15

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.