Mouse (GRCm39)
Description

polypyrimidine tract binding protein 3 [Source:MGI Symbol;Acc:MGI:1923334]

Gene Synonyms

5830471K22Rik, Rod1

Location
About this transcript

This transcript has 14 exons, is annotated with 26 domains and features, is associated with 3122 variant alleles and maps to 128 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000174586.8Ptbp3-2126640554aaENSMUSP00000133612.2
 
Protein coding
G3UXA6 Ensembl CanonicalGENCODE basicTSL:5
ENSMUST00000030076.12Ptbp3-2016855523aaENSMUSP00000030076.6
 
Protein coding
CCDS18221Q8BHD7 GENCODE basicAPPRIS P4TSL:1
ENSMUST00000102883.11Ptbp3-2023409551aaENSMUSP00000099947.5
 
Protein coding
CCDS18220G8JL74 GENCODE basicTSL:1
ENSMUST00000173699.8Ptbp3-2102721457aaENSMUSP00000134290.2
 
Protein coding
G3UZ01 GENCODE basicTSL:5
ENSMUST00000172768.8Ptbp3-2082147520aaENSMUSP00000134102.2
 
Protein coding
Q8BHD7-2 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000148331.9Ptbp3-2052016520aaENSMUSP00000122840.3
 
Protein coding
Q8BHD7-2 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000140925.3Ptbp3-204606104aaENSMUSP00000122138.3
 
Protein coding
F7C521 GENCODE basicTSL:3
ENSMUST00000172471.2Ptbp3-207566188aaENSMUSP00000133886.2
 
Protein coding
G3UXZ8 TSL:5CDS 5' and 3' incomplete
ENSMUST00000173884.8Ptbp3-211550146aaENSMUSP00000133996.2
 
Protein coding
G3UY95 TSL:3CDS 3' incomplete
ENSMUST00000174748.8Ptbp3-213128645aaENSMUSP00000133884.2
 
Nonsense mediated decay
G3UXZ6 TSL:5
ENSMUST00000134879.3Ptbp3-20355841aaENSMUSP00000134490.2
 
Nonsense mediated decay
G3UZG7 TSL:3
ENSMUST00000173268.8Ptbp3-209669No protein-
 
Retained intron
-TSL:3
ENSMUST00000151313.3Ptbp3-206447No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 14, Coding exons: 13, Transcript length: 2,147 bps, Translation length: 520 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BHD7

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000172768.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.