Mouse (GRCm39)
Description

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A [Source:MGI Symbol;Acc:MGI:107560]

Gene Synonyms

SemB, Semab

Location
About this transcript

This transcript has 5 exons, is associated with 799 variant alleles and maps to 181 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000029700.12Sema4a-2013205760aaENSMUSP00000029700.6
 
Protein coding
CCDS17475Q62178 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000165898.8Sema4a-2133125760aaENSMUSP00000128510.2
 
Protein coding
CCDS17475Q62178 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000169222.8Sema4a-2153084760aaENSMUSP00000128887.2
 
Protein coding
CCDS17475Q62178 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000166237.8Sema4a-2143046760aaENSMUSP00000125909.2
 
Protein coding
CCDS17475Q62178 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000107531.8Sema4a-2022897628aaENSMUSP00000103155.2
 
Protein coding
D3YWV5 GENCODE basicTSL:5
ENSMUST00000127436.8Sema4a-205845233aaENSMUSP00000118706.2
 
Protein coding
D3YZ30 TSL:3CDS 3' incomplete
ENSMUST00000147200.8Sema4a-210706203aaENSMUSP00000123061.2
 
Protein coding
D3YUM4 TSL:5CDS 3' incomplete
ENSMUST00000141471.2Sema4a-20863060aaENSMUSP00000114330.2
 
Protein coding
D3YVM6 TSL:5CDS 3' incomplete
ENSMUST00000125526.8Sema4a-204506113aaENSMUSP00000119028.2
 
Protein coding
D3Z336 TSL:3CDS 3' incomplete
ENSMUST00000123753.8Sema4a-20338517aaENSMUSP00000120084.2
 
Protein coding
D3YWK5 TSL:2CDS 3' incomplete
ENSMUST00000184487.8Sema4a-216866170aaENSMUSP00000139126.2
 
Nonsense mediated decay
V9GXF5 TSL:5
ENSMUST00000184876.8Sema4a-217748180aaENSMUSP00000139159.2
 
Nonsense mediated decay
V9GXH9 TSL:5
ENSMUST00000185137.8Sema4a-21969947aaENSMUSP00000138858.2
 
Nonsense mediated decay
V9GWW2 TSL:3CDS 5' incomplete
ENSMUST00000146921.2Sema4a-209371No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000135539.8Sema4a-2062487No protein-
 
Retained intron
-TSL:2
ENSMUST00000149145.2Sema4a-2112357No protein-
 
Retained intron
-TSL:5
ENSMUST00000156108.8Sema4a-2122108No protein-
 
Retained intron
-TSL:2
ENSMUST00000135732.8Sema4a-207713No protein-
 
Retained intron
-TSL:3
ENSMUST00000184972.2Sema4a-218465No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 5, Coding exons: 0, Transcript length: 2,108 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENSMUST00000156108.8

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.