Mouse (GRCm39)
Description

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A [Source:MGI Symbol;Acc:MGI:107560]

Gene Synonyms

SemB, Semab

Location
About this transcript

This transcript has 15 exons, is annotated with 18 domains and features, is associated with 1681 variant alleles and maps to 268 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000029700.12Sema4a-2013205760aaENSMUSP00000029700.6
 
Protein coding
CCDS17475Q62178 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000165898.8Sema4a-2133125760aaENSMUSP00000128510.2
 
Protein coding
CCDS17475Q62178 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000169222.8Sema4a-2153084760aaENSMUSP00000128887.2
 
Protein coding
CCDS17475Q62178 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000166237.8Sema4a-2143046760aaENSMUSP00000125909.2
 
Protein coding
CCDS17475Q62178 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000107531.8Sema4a-2022897628aaENSMUSP00000103155.2
 
Protein coding
D3YWV5 GENCODE basicTSL:5
ENSMUST00000127436.8Sema4a-205845233aaENSMUSP00000118706.2
 
Protein coding
D3YZ30 TSL:3CDS 3' incomplete
ENSMUST00000147200.8Sema4a-210706203aaENSMUSP00000123061.2
 
Protein coding
D3YUM4 TSL:5CDS 3' incomplete
ENSMUST00000141471.2Sema4a-20863060aaENSMUSP00000114330.2
 
Protein coding
D3YVM6 TSL:5CDS 3' incomplete
ENSMUST00000125526.8Sema4a-204506113aaENSMUSP00000119028.2
 
Protein coding
D3Z336 TSL:3CDS 3' incomplete
ENSMUST00000123753.8Sema4a-20338517aaENSMUSP00000120084.2
 
Protein coding
D3YWK5 TSL:2CDS 3' incomplete
ENSMUST00000184487.8Sema4a-216866170aaENSMUSP00000139126.2
 
Nonsense mediated decay
V9GXF5 TSL:5
ENSMUST00000184876.8Sema4a-217748180aaENSMUSP00000139159.2
 
Nonsense mediated decay
V9GXH9 TSL:5
ENSMUST00000185137.8Sema4a-21969947aaENSMUSP00000138858.2
 
Nonsense mediated decay
V9GWW2 TSL:3CDS 5' incomplete
ENSMUST00000146921.2Sema4a-209371No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000135539.8Sema4a-2062487No protein-
 
Retained intron
-TSL:2
ENSMUST00000149145.2Sema4a-2112357No protein-
 
Retained intron
-TSL:5
ENSMUST00000156108.8Sema4a-2122108No protein-
 
Retained intron
-TSL:2
ENSMUST00000135732.8Sema4a-207713No protein-
 
Retained intron
-TSL:3
ENSMUST00000184972.2Sema4a-218465No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 15, Coding exons: 14, Transcript length: 3,125 bps, Translation length: 760 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q62178

CCDS

This transcript is a member of the Mouse CCDS set: CCDS17475

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000165898.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.