Mouse (GRCm39)
Description

RNA binding motif protein 39 [Source:MGI Symbol;Acc:MGI:2157953]

Gene Synonyms

1500012C14Rik, 2310040E03Rik, B330012G18Rik, Caper alpha, Rnpc2, caper

About this transcript

This transcript has 17 exons, is annotated with 54 domains and features, is associated with 1881 variant alleles and maps to 414 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000109587.9Rbm39-2032810530aaENSMUSP00000105216.3
 
Protein coding
CCDS16964Q8VH51 Ensembl CanonicalGENCODE basicTSL:1
ENSMUST00000029149.13Rbm39-2012711524aaENSMUSP00000029149.7
 
Protein coding
CCDS71168Q8VH51-2 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000146297.8Rbm39-2172580524aaENSMUSP00000119298.2
 
Protein coding
CCDS71168Q8VH51-2 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000126992.8Rbm39-2041090273aaENSMUSP00000116950.2
 
Protein coding
B7ZD61 TSL:5CDS 3' incomplete
ENSMUST00000148794.8Rbm39-220931311aaENSMUSP00000117462.2
 
Protein coding
F7AA45 TSL:5CDS 5' and 3' incomplete
ENSMUST00000146288.8Rbm39-216754156aaENSMUSP00000114824.2
 
Protein coding
B7ZD63 TSL:5CDS 3' incomplete
ENSMUST00000109584.8Rbm39-20266738aaENSMUSP00000105213.2
 
Protein coding
B7ZD64 GENCODE basicTSL:5
ENSMUST00000142071.8Rbm39-2152744415aaENSMUSP00000116820.2
 
Nonsense mediated decay
E9Q8F0 TSL:5
ENSMUST00000153514.8Rbm39-223212747aaENSMUSP00000119204.2
 
Nonsense mediated decay
E9Q999 TSL:5
ENSMUST00000155837.8Rbm39-225212040aaENSMUSP00000119541.2
 
Nonsense mediated decay
D6RCZ8 TSL:5
ENSMUST00000137566.8Rbm39-21274340aaENSMUSP00000119054.2
 
Nonsense mediated decay
D6RCZ8 TSL:3
ENSMUST00000146549.8Rbm39-21870740aaENSMUSP00000115488.2
 
Nonsense mediated decay
D6RCZ8 TSL:3
ENSMUST00000152919.3Rbm39-22269940aaENSMUSP00000124018.2
 
Nonsense mediated decay
D6RCZ8 TSL:5
ENSMUST00000147098.8Rbm39-21959339aaENSMUSP00000120597.2
 
Nonsense mediated decay
E9PZF9 TSL:3
ENSMUST00000154677.8Rbm39-22458562aaENSMUSP00000121603.2
 
Nonsense mediated decay
D6RJ85 TSL:5
ENSMUST00000140001.2Rbm39-214685No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000131625.8Rbm39-207546No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000150272.8Rbm39-221497No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000130516.8Rbm39-2061456No protein-
 
Retained intron
-TSL:2
ENSMUST00000128243.2Rbm39-2051008No protein-
 
Retained intron
-TSL:1
ENSMUST00000137340.2Rbm39-211715No protein-
 
Retained intron
-TSL:1
ENSMUST00000138381.8Rbm39-213711No protein-
 
Retained intron
-TSL:5
ENSMUST00000137297.2Rbm39-210707No protein-
 
Retained intron
-TSL:3
ENSMUST00000135274.2Rbm39-209695No protein-
 
Retained intron
-TSL:2
ENSMUST00000132929.8Rbm39-208672No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 17, Coding exons: 16, Transcript length: 2,810 bps, Translation length: 530 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8VH51

CCDS

This transcript is a member of the Mouse CCDS set: CCDS16964

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000109587.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.