Mouse (GRCm39)
Description

AT hook containing transcription factor 1 [Source:MGI Symbol;Acc:MGI:1915033]

Gene Synonyms

6230412P20Rik, Elys

About this transcript

This transcript has 36 exons, is annotated with 32 domains and features, is associated with 2739 variant alleles and maps to 452 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000027768.14Ahctf1-20185062243aaENSMUSP00000027768.8
 
Protein coding
CCDS15564Q8CJF7 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000140489.2Ahctf1-2041494116aaENSMUSP00000115253.2
 
Protein coding
F6S6E4 TSL:1CDS 5' incomplete
ENSMUST00000145968.3Ahctf1-205530176aaENSMUSP00000115795.2
 
Protein coding
F6SJR1 TSL:5CDS 5' and 3' incomplete
ENSMUST00000125816.2Ahctf1-202769104aaENSMUSP00000119738.2
 
Nonsense mediated decay
F6QTR3 TSL:3CDS 5' incomplete
ENSMUST00000127250.2Ahctf1-20368035aaENSMUSP00000120551.2
 
Nonsense mediated decay
F6XUM6 TSL:2CDS 5' incomplete
ENSMUST00000194536.2Ahctf1-2093232No protein-
 
Retained intron
-TSL:NA
ENSMUST00000192645.2Ahctf1-2083156No protein-
 
Retained intron
-TSL:NA
ENSMUST00000151734.2Ahctf1-2072570No protein-
 
Retained intron
-TSL:1
ENSMUST00000147137.2Ahctf1-206746No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 36, Coding exons: 35, Transcript length: 8,506 bps, Translation length: 2,243 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8CJF7

CCDS

This transcript is a member of the Mouse CCDS set: CCDS15564

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000027768.14

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.