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Description

serrate RNA effector molecule homolog (Arabidopsis) [Source:MGI Symbol;Acc:MGI:1933527]

Gene Synonyms

2810019G02Rik, Ars2, Asr2

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Srrt-201ENSMUST00000040873.123024875aaENSMUSP00000043123.8
 
Protein coding
CCDS39331Q99MR6-1 GENCODE basicAPPRIS P3TSL:5
Srrt-212ENSMUST00000199243.52988868aaENSMUSP00000143232.2
 
Protein coding
CCDS80440Q99MR6-4 GENCODE basicAPPRIS ALT2TSL:1
Srrt-209ENSMUST00000197466.52972864aaENSMUSP00000142564.2
 
Protein coding
CCDS80439Q99MR6-3 GENCODE basicAPPRIS ALT2TSL:5
Srrt-202ENSMUST00000196109.51660517aaENSMUSP00000142351.2
 
Protein coding
-A0A0G2JDF8 TSL:5CDS 5' incomplete
Srrt-216ENSMUST00000199756.3808269aaENSMUSP00000143442.2
 
Protein coding
-A0A0G2JG65 TSL:5CDS 5' and 3' incomplete
Srrt-211ENSMUST00000198526.53001467aaENSMUSP00000142435.2
 
Nonsense mediated decay
-A0A0G2JDN3 TSL:5
Srrt-215ENSMUST00000199605.2931239aaENSMUSP00000142344.2
 
Nonsense mediated decay
-A0A0G2JDF1 TSL:5CDS 5' incomplete
Srrt-218ENSMUST00000223263.268963aaENSMUSP00000152514.2
 
Nonsense mediated decay
-A0A1Y7VNN4 TSL:5CDS 5' incomplete
Srrt-213ENSMUST00000199365.559952aaENSMUSP00000143454.2
 
Nonsense mediated decay
-A0A0G2JG75 TSL:5CDS 5' incomplete
Srrt-210ENSMUST00000197484.247650aaENSMUSP00000142660.2
 
Nonsense mediated decay
-A0A0G2JE73 TSL:3
Srrt-214ENSMUST00000199473.22004No protein-
 
Retained intron
--TSL:5
Srrt-217ENSMUST00000200643.2884No protein-
 
Retained intron
--TSL:2
Srrt-206ENSMUST00000197144.2835No protein-
 
Retained intron
--TSL:2
Srrt-203ENSMUST00000196394.2767No protein-
 
Retained intron
--TSL:2
Srrt-205ENSMUST00000196960.2666No protein-
 
Retained intron
--TSL:2
Srrt-207ENSMUST00000197376.5600No protein-
 
Retained intron
--TSL:3
Srrt-204ENSMUST00000196576.2516No protein-
 
Retained intron
--TSL:2
Srrt-208ENSMUST00000197409.2416No protein-
 
Retained intron
--TSL:2
Description

Spi-1 proto-oncogene [Source:HGNC Symbol;Acc:HGNC:11241]

Gene Synonyms

OF, PU.1, SFPI1, SPI-1, SPI-A

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
SPI1-202ENST00000378538.81374270aaENSP00000367799.4
 
Protein coding
CCDS7933P17947-1 NM_003120.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
SPI1-201ENST00000227163.81168271aaENSP00000227163.4
 
Protein coding
CCDS44591P17947-2 -GENCODE basicAPPRIS ALT1TSL:2
SPI1-204ENST00000533968.11290245aaENSP00000438846.1
 
Protein coding
-F5H3K6 -GENCODE basicTSL:1
SPI1-203ENST00000533030.166135aaENSP00000443865.1
 
Protein coding
-F5GZ94 -GENCODE basicTSL:2
Description

sodium voltage-gated channel alpha subunit 1 [Source:HGNC Symbol;Acc:HGNC:10585]

Gene Synonyms

FEB3, GEFSP2, HBSCI, NAC1, Nav1.1, SCN1, SMEI

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
SCN1A-224ENST00000674923.1119402009aaENSP00000501589.1
 
Protein coding
CCDS54413-NM_001165963.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS ALT1
SCN1A-218ENST00000641575.1128741997aaENSP00000492917.1
 
Protein coding
CCDS86891A0A286YF26 -GENCODE basic
SCN1A-201ENST00000303395.9118532009aaENSP00000303540.4
 
Protein coding
CCDS54413P35498-1 -GENCODE basicAPPRIS P4TSL:5
SCN1A-216ENST00000637988.185621998aaENSP00000490780.1
 
Protein coding
CCDS33316P35498-2 -GENCODE basicAPPRIS ALT1TSL:5
SCN1A-208ENST00000635750.182991998aaENSP00000490799.1
 
Protein coding
CCDS33316P35498-2 -GENCODE basicAPPRIS ALT1TSL:5
SCN1A-202ENST00000375405.780971998aaENSP00000364554.3
 
Protein coding
CCDS33316P35498-2 -GENCODE basicAPPRIS ALT1TSL:5
SCN1A-203ENST00000409050.159461981aaENSP00000386312.1
 
Protein coding
CCDS54414P35498-3 -GENCODE basicTSL:5
SCN1A-219ENST00000641603.1125061915aaENSP00000492945.1
 
Protein coding
-A0A286YEQ8 -GENCODE basic
SCN1A-209ENST00000635776.1101071618aaENSP00000490692.1
 
Protein coding
-A0A1B0GVX7 -GENCODE basicTSL:5
SCN1A-217ENST00000640036.181311998aaENSP00000491573.1
 
Protein coding
-A0A1W2PPJ3 -GENCODE basicTSL:5
SCN1A-214ENST00000637285.21333aaENSP00000490612.1
 
Protein coding
---TSL:5CDS 3' incomplete
SCN1A-220ENST00000641996.112903149aaENSP00000493054.1
 
Nonsense mediated decay
-A0A286YFA8 --
SCN1A-211ENST00000636194.18508829aaENSP00000490288.1
 
Nonsense mediated decay
-A0A1B0GUX7 -TSL:5
SCN1A-222ENST00000671940.18315629aaENSP00000500336.1
 
Nonsense mediated decay
-A0A5F9ZHI6 --
SCN1A-213ENST00000637038.14268331aaENSP00000490184.1
 
Nonsense mediated decay
-A0A1B0GUN7 -TSL:5CDS 5' incomplete
SCN1A-212ENST00000636759.13606145aaENSP00000490895.1
 
Nonsense mediated decay
-A0A1B0GWE6 -TSL:5
SCN1A-210ENST00000635893.116830aaENSP00000489986.1
 
Nonsense mediated decay
-A0A1B0GU68 -TSL:5CDS 5' incomplete
SCN1A-221ENST00000642141.1921No protein-
 
Processed transcript
----
SCN1A-223ENST00000673490.110569No protein-
 
Retained intron
----
SCN1A-215ENST00000637968.14614No protein-
 
Retained intron
---TSL:5
SCN1A-206ENST00000507401.2711No protein-
 
Retained intron
---TSL:3
SCN1A-207ENST00000625916.1560No protein-
 
Retained intron
---TSL:4
SCN1A-204ENST00000473295.2544No protein-
 
Retained intron
---TSL:4
SCN1A-205ENST00000491429.1542No protein-
 
Retained intron
---TSL:4
Description

transcription factor 4 [Source:MGI Symbol;Acc:MGI:98506]

Gene Synonyms

5730422P05Rik, ASP-I2, E2-2, E2.2, ITF-2, ITF-2b, ME2, MITF-2A, MITF-2B, SEF-2, SEF2-1, TFE, bHLHb19

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Tcf4-207ENSMUST00000114985.108577670aaENSMUSP00000110636.4
 
Protein coding
CCDS29329Q60722-1 GENCODE basicAPPRIS P3TSL:1
Tcf4-202ENSMUST00000078486.137147670aaENSMUSP00000077577.7
 
Protein coding
CCDS29329Q60722-1 GENCODE basicAPPRIS P3TSL:5
Tcf4-206ENSMUST00000114982.83694666aaENSMUSP00000110633.2
 
Protein coding
CCDS50315Q60722-3 GENCODE basicAPPRIS ALT1TSL:1
Tcf4-246ENSMUST00000202116.42986666aaENSMUSP00000144512.2
 
Protein coding
CCDS50315Q60722-3 GENCODE basicAPPRIS ALT1TSL:1
Tcf4-205ENSMUST00000114980.82192670aaENSMUSP00000110631.3
 
Protein coding
CCDS29329Q60722-1 GENCODE basicAPPRIS P3TSL:5
Tcf4-201ENSMUST00000066717.124250692aaENSMUSP00000067318.6
 
Protein coding
-E9Q8G4 GENCODE basicTSL:1
Tcf4-203ENSMUST00000114977.53070507aaENSMUSP00000110628.2
 
Protein coding
-Q91YV0 GENCODE basicTSL:1
Tcf4-240ENSMUST00000201781.42779646aaENSMUSP00000144209.2
 
Protein coding
-A0A0J9YUZ0 GENCODE basicTSL:5
Tcf4-238ENSMUST00000201631.42660642aaENSMUSP00000144285.2
 
Protein coding
-A0A0J9YUP9 GENCODE basicTSL:5
Tcf4-254ENSMUST00000202674.42615641aaENSMUSP00000144221.2
 
Protein coding
-A0A0J9YUK1 GENCODE basicTSL:5
Tcf4-250ENSMUST00000202458.42610587aaENSMUSP00000143875.2
 
Protein coding
-A0A0J9YTW1 GENCODE basicTSL:5
Tcf4-204ENSMUST00000114978.92437511aaENSMUSP00000110629.3
 
Protein coding
-Q60722-2 GENCODE basicTSL:1
Tcf4-249ENSMUST00000202435.42427646aaENSMUSP00000144407.2
 
Protein coding
-A0A0J9YUZ0 GENCODE basicTSL:5
Tcf4-230ENSMUST00000201205.42270541aaENSMUSP00000144273.2
 
Protein coding
-A0A0J9YTU7 GENCODE basicTSL:5
Tcf4-226ENSMUST00000201094.42172537aaENSMUSP00000144169.2
 
Protein coding
-A0A0J9YUG4 GENCODE basicTSL:5
Tcf4-257ENSMUST00000202772.42125606aaENSMUSP00000143987.2
 
Protein coding
-A0A0J9YU37 GENCODE basicTSL:5
Tcf4-248ENSMUST00000202354.42120641aaENSMUSP00000144646.2
 
Protein coding
-A0A0J9YVG2 GENCODE basicTSL:5
Tcf4-258ENSMUST00000202937.42103541aaENSMUSP00000143857.2
 
Protein coding
-A0A0J9YTU7 GENCODE basicTSL:5
Tcf4-210ENSMUST00000128706.82066178aaENSMUSP00000144519.2
 
Protein coding
-Q8BPX7 GENCODE basicTSL:1
Tcf4-253ENSMUST00000202610.41959610aaENSMUSP00000144670.2
 
Protein coding
-A0A0J9YVI1 GENCODE basicTSL:5
Tcf4-243ENSMUST00000202057.41941537aaENSMUSP00000144647.2
 
Protein coding
-A0A0J9YUG4 GENCODE basicTSL:5
Tcf4-234ENSMUST00000201410.41915537aaENSMUSP00000143950.2
 
Protein coding
-A0A0J9YUG4 GENCODE basicTSL:5
Tcf4-252ENSMUST00000202477.41873537aaENSMUSP00000144219.2
 
Protein coding
-A0A0J9YUG4 GENCODE basicTSL:5
Tcf4-251ENSMUST00000202474.41810507aaENSMUSP00000143820.2
 
Protein coding
-A0A0J9YTR9 GENCODE basicTSL:5
Tcf4-218ENSMUST00000200862.41462320aaENSMUSP00000144338.2
 
Protein coding
-A0A0J9YUT7 TSL:5CDS 3' incomplete
Tcf4-225ENSMUST00000201091.4959271aaENSMUSP00000144386.2
 
Protein coding
-A0A0J9YUX6 TSL:3CDS 3' incomplete
Tcf4-237ENSMUST00000201627.4881106aaENSMUSP00000144649.2
 
Protein coding
-A0A1B0GXC8 TSL:5CDS 3' incomplete
Tcf4-235ENSMUST00000201537.4876157aaENSMUSP00000144655.2
 
Protein coding
-A0A0J9YVG8 TSL:5CDS 3' incomplete
Tcf4-242ENSMUST00000201964.4843172aaENSMUSP00000144070.2
 
Protein coding
-A0A0J9YU91 TSL:5CDS 3' incomplete
Tcf4-232ENSMUST00000201288.4836220aaENSMUSP00000144494.2
 
Protein coding
-A0A0J9YV54 TSL:5CDS 3' incomplete
Tcf4-216ENSMUST00000200703.4831167aaENSMUSP00000144583.2
 
Protein coding
-A0A0J9YVB3 TSL:5CDS 3' incomplete
Tcf4-247ENSMUST00000202350.4809155aaENSMUSP00000144154.2
 
Protein coding
-A0A0J9YUF5 TSL:5CDS 3' incomplete
Tcf4-220ENSMUST00000200921.4809100aaENSMUSP00000143892.2
 
Protein coding
-A0A0J9YTX3 TSL:3CDS 3' incomplete
Tcf4-256ENSMUST00000202765.4802224aaENSMUSP00000144332.2
 
Protein coding
-A0A0J9YUT3 TSL:5CDS 3' incomplete
Tcf4-260ENSMUST00000207214.2787117aaENSMUSP00000146869.2
 
Protein coding
-A0A140LIL4 TSL:5CDS 3' incomplete
Tcf4-222ENSMUST00000201037.4765220aaENSMUSP00000144488.2
 
Protein coding
-A0A0J9YV50 TSL:5CDS 3' incomplete
Tcf4-231ENSMUST00000201235.4746184aaENSMUSP00000144473.2
 
Protein coding
-A0A0J9YV39 TSL:5CDS 3' incomplete
Tcf4-227ENSMUST00000201124.4733201aaENSMUSP00000144080.2
 
Protein coding
-A0A0J9YU99 TSL:5CDS 3' incomplete
Tcf4-221ENSMUST00000200966.4731168aaENSMUSP00000144045.2
 
Protein coding
-A0A0J9YU75 TSL:5CDS 3' incomplete
Tcf4-213ENSMUST00000145918.5619121aaENSMUSP00000144298.2
 
Protein coding
-A0A0J9YUR0 TSL:5CDS 3' incomplete
Tcf4-262ENSMUST00000209174.2600163aaENSMUSP00000147155.2
 
Protein coding
-A0A140LJC0 TSL:5CDS 3' incomplete
Tcf4-217ENSMUST00000200813.4582119aaENSMUSP00000144397.2
 
Protein coding
-A0A0J9YUY3 TSL:5CDS 3' incomplete
Tcf4-233ENSMUST00000201299.4576143aaENSMUSP00000144599.2
 
Protein coding
-A0A0J9YVC6 TSL:5CDS 3' incomplete
Tcf4-245ENSMUST00000202074.4567145aaENSMUSP00000144544.2
 
Protein coding
-A0A0J9YV88 TSL:5CDS 3' incomplete
Tcf4-229ENSMUST00000201181.4508107aaENSMUSP00000144376.2
 
Protein coding
-A0A0J9YUW9 TSL:5CDS 3' incomplete
Tcf4-259ENSMUST00000203002.4482138aaENSMUSP00000144315.2
 
Protein coding
-A0A0J9YUS2 TSL:5CDS 3' incomplete
Tcf4-255ENSMUST00000202751.4923198aaENSMUSP00000144064.2
 
Nonsense mediated decay
-A0A0J9YU89 TSL:5
Tcf4-261ENSMUST00000209116.272180aaENSMUSP00000147136.2
 
Nonsense mediated decay
-A0A140LJA2 TSL:5
Tcf4-215ENSMUST00000155695.5794No protein-
 
Processed transcript
--TSL:1
Tcf4-223ENSMUST00000201045.5782No protein-
 
Processed transcript
--TSL:5
Tcf4-228ENSMUST00000201157.2780No protein-
 
Processed transcript
--TSL:5
Tcf4-219ENSMUST00000200902.4617No protein-
 
Processed transcript
--TSL:5
Tcf4-212ENSMUST00000136151.8448No protein-
 
Processed transcript
--TSL:3
Tcf4-244ENSMUST00000202058.4353No protein-
 
Processed transcript
--TSL:5
Tcf4-208ENSMUST00000125154.8332No protein-
 
Processed transcript
--TSL:3
Tcf4-241ENSMUST00000201892.24019No protein-
 
Retained intron
--TSL:NA
Tcf4-214ENSMUST00000146908.23693No protein-
 
Retained intron
--TSL:1
Tcf4-224ENSMUST00000201081.23625No protein-
 
Retained intron
--TSL:NA
Tcf4-209ENSMUST00000126946.32822No protein-
 
Retained intron
--TSL:NA
Tcf4-211ENSMUST00000136019.31001No protein-
 
Retained intron
--TSL:2
Tcf4-239ENSMUST00000201747.4665No protein-
 
Retained intron
--TSL:3
Tcf4-236ENSMUST00000201589.2373No protein-
 
Retained intron
--TSL:2
Description

phosphatidylinositol glycan anchor biosynthesis, class Q [Source:MGI Symbol;Acc:MGI:1333114]

Gene Synonyms

Gpi1, Gpi1h, Gpi1p, Gpih

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Pigq-202ENSMUST00000097368.103233641aaENSMUSP00000094981.4
 
Protein coding
CCDS70774Q3TD14 GENCODE basicTSL:1
Pigq-201ENSMUST00000026823.163173581aaENSMUSP00000026823.9
 
Protein coding
CCDS28538Q3TF56 Q9QYT7 GENCODE basicAPPRIS P2TSL:1
Pigq-218ENSMUST00000208043.22987581aaENSMUSP00000146704.2
 
Protein coding
CCDS28538Q3TF56 Q9QYT7 GENCODE basicAPPRIS P2TSL:5
Pigq-222ENSMUST00000237570.22931516aaENSMUSP00000157676.2
 
Protein coding
-A0A140LHE9 GENCODE basicAPPRIS ALT2
Pigq-219ENSMUST00000208071.22926516aaENSMUSP00000146387.2
 
Protein coding
-A0A140LHE9 GENCODE basicAPPRIS ALT2TSL:5
Pigq-209ENSMUST00000140304.21835378aaENSMUSP00000146785.2
 
Protein coding
-A0A140LIE2 GENCODE basicTSL:1
Pigq-205ENSMUST00000133650.91398452aaENSMUSP00000117102.2
 
Protein coding
-F6YYP1 TSL:5CDS 5' incomplete
Pigq-208ENSMUST00000139226.2946248aaENSMUSP00000115447.2
 
Protein coding
-D3Z0A4 TSL:5CDS 3' incomplete
Pigq-206ENSMUST00000135253.3681227aaENSMUSP00000122239.3
 
Protein coding
-F7BU94 TSL:5CDS 5' and 3' incomplete
Pigq-210ENSMUST00000145745.3679200aaENSMUSP00000119772.3
 
Protein coding
-D3Z1K3 TSL:2CDS 3' incomplete
Pigq-215ENSMUST00000207073.2586139aaENSMUSP00000146634.2
 
Protein coding
-A0A140LI16 TSL:5CDS 5' incomplete
Pigq-212ENSMUST00000148307.2375106aaENSMUSP00000118632.2
 
Protein coding
-D3YZX1 TSL:2CDS 3' incomplete
Pigq-213ENSMUST00000148382.236863aaENSMUSP00000119871.2
 
Protein coding
-D3Z1F8 TSL:3CDS 3' incomplete
Pigq-221ENSMUST00000208499.210735aaENSMUSP00000146415.2
 
Protein coding
-A0A140LHH5 TSL:1CDS 5' and 3' incomplete
Pigq-203ENSMUST00000123929.977945aaENSMUSP00000120852.2
 
Nonsense mediated decay
-F6VRD3 TSL:3CDS 5' incomplete
Pigq-216ENSMUST00000207496.2586102aaENSMUSP00000147200.2
 
Nonsense mediated decay
-A0A140LJG0 TSL:5CDS 5' incomplete
Pigq-220ENSMUST00000208242.238986aaENSMUSP00000147041.2
 
Nonsense mediated decay
-A0A140LJ17 TSL:1CDS 5' incomplete
Pigq-217ENSMUST00000207777.2621No protein-
 
Processed transcript
--TSL:3
Pigq-211ENSMUST00000148045.83278No protein-
 
Retained intron
--TSL:1
Pigq-204ENSMUST00000124032.21103No protein-
 
Retained intron
--TSL:1
Pigq-207ENSMUST00000139078.31014No protein-
 
Retained intron
--TSL:2
Pigq-214ENSMUST00000156924.2763No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 6, Coding exons: 0, Transcript length: 621 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENSMUST00000207777.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays

    HASH(0x25003a18)