Mouse (GRCm39)
Description

trophinin [Source:MGI Symbol;Acc:MGI:1928994]

Gene Synonyms

Maged3, Maged3l, Tnn, Trol, magphinin, magphinin-alpha, magphinin-beta 2, magphinin-gamma, necdin and trophinin like, trophinin-2

About this transcript

This transcript has 14 exons, is annotated with 24 domains and features, is associated with 1089 variant alleles and maps to 311 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000112709.8Tro-20366102087aaENSMUSP00000108329.2
 
Protein coding
CCDS30465Q6DIC6 Ensembl CanonicalGENCODE basicAPPRIS P2TSL:5
ENSMUST00000087258.10Tro-20265592087aaENSMUSP00000084513.4
 
Protein coding
CCDS30465Q6DIC6 GENCODE basicAPPRIS P2TSL:1
ENSMUST00000087253.11Tro-2013224972aaENSMUSP00000084508.5
 
Protein coding
CCDS53221E9Q886 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000151403.9Tro-2052715838aaENSMUSP00000120457.3
 
Protein coding
CCDS72448E9Q098 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000163969.8Tro-2072644802aaENSMUSP00000126054.2
 
Protein coding
CCDS81183E9Q160 GENCODE basicTSL:1
ENSMUST00000148604.2Tro-2041822560aaENSMUSP00000116905.2
 
Protein coding
A2AFN3 TSL:1CDS 3' incomplete
ENSMUST00000164071.2Tro-208891296aaENSMUSP00000126042.2
 
Protein coding
E9Q1Q4 GENCODE basicAPPRIS ALT2TSL:5
ENSMUST00000163450.8Tro-20688835aaENSMUSP00000127689.2
 
Nonsense mediated decay
E9Q1E1 TSL:5
ENSMUST00000171775.2Tro-211832No protein-
 
Retained intron
-TSL:5
ENSMUST00000169450.8Tro-210684No protein-
 
Retained intron
-TSL:2
ENSMUST00000165192.2Tro-209427No protein-
 
Retained intron
-TSL:5
Statistics

Exons: 14, Coding exons: 12, Transcript length: 3,224 bps, Translation length: 972 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS53221

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000087253.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.