Mouse (GRCm39)
Description

trophinin [Source:MGI Symbol;Acc:MGI:1928994]

Gene Synonyms

Maged3, Maged3l, Tnn, Trol, magphinin, magphinin-alpha, magphinin-beta 2, magphinin-gamma, necdin and trophinin like, trophinin-2

About this transcript

This transcript has 4 exons, is associated with 587 variant alleles and maps to 99 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000112709.8Tro-20366102087aaENSMUSP00000108329.2
 
Protein coding
CCDS30465Q6DIC6 Ensembl CanonicalGENCODE basicAPPRIS P2TSL:5
ENSMUST00000087258.10Tro-20265592087aaENSMUSP00000084513.4
 
Protein coding
CCDS30465Q6DIC6 GENCODE basicAPPRIS P2TSL:1
ENSMUST00000087253.11Tro-2013224972aaENSMUSP00000084508.5
 
Protein coding
CCDS53221E9Q886 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000151403.9Tro-2052715838aaENSMUSP00000120457.3
 
Protein coding
CCDS72448E9Q098 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000163969.8Tro-2072644802aaENSMUSP00000126054.2
 
Protein coding
CCDS81183E9Q160 GENCODE basicTSL:1
ENSMUST00000148604.2Tro-2041822560aaENSMUSP00000116905.2
 
Protein coding
A2AFN3 TSL:1CDS 3' incomplete
ENSMUST00000164071.2Tro-208891296aaENSMUSP00000126042.2
 
Protein coding
E9Q1Q4 GENCODE basicAPPRIS ALT2TSL:5
ENSMUST00000163450.8Tro-20688835aaENSMUSP00000127689.2
 
Nonsense mediated decay
E9Q1E1 TSL:5
ENSMUST00000171775.2Tro-211832No protein-
 
Retained intron
-TSL:5
ENSMUST00000169450.8Tro-210684No protein-
 
Retained intron
-TSL:2
ENSMUST00000165192.2Tro-209427No protein-
 
Retained intron
-TSL:5
Statistics

Exons: 4, Coding exons: 0, Transcript length: 832 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000171775.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.