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EnsemblEnsembl Home
Description

single stranded DNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:15674]

Gene Synonyms

CSDP, FLJ10355, SSDP, SSDP1

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000610401.5SSBP3-2163276388aaENSP00000479674.2
 
Protein coding
CCDS591A0A087WVT6 -Ensembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENST00000357475.9SSBP3-2023020368aaENSP00000350067.4
 
Protein coding
CCDS590Q9BWW4-3 -GENCODE basicTSL:1
ENST00000371319.8SSBP3-2032784361aaENSP00000360370.3
 
Protein coding
CCDS30726Q9BWW4-2 -GENCODE basicTSL:2
ENST00000417664.7SSBP3-2052865278aaENSP00000414361.2
 
Protein coding
-Q9NW25 -GENCODE basicTSL:5
ENST00000525990.1SSBP3-210701101aaENSP00000431654.1
 
Protein coding
-E9PK49 -TSL:2CDS 3' incomplete
ENST00000444533.5SSBP3-208560156aaENSP00000405880.1
 
Protein coding
-Q5T863 -TSL:3CDS 5' incomplete
ENST00000326956.12SSBP3-2012912No protein-
 
Processed transcript
---TSL:2
ENST00000533946.6SSBP3-2151645No protein-
 
Processed transcript
---TSL:3
ENST00000426150.5SSBP3-207851No protein-
 
Processed transcript
---TSL:3
ENST00000528787.1SSBP3-211577No protein-
 
Processed transcript
---TSL:4
ENST00000448572.1SSBP3-209454No protein-
 
Processed transcript
---TSL:3
ENST00000528930.6SSBP3-2122567No protein-
 
Retained intron
---TSL:1
ENST00000371320.8SSBP3-2042457No protein-
 
Retained intron
---TSL:1
ENST00000420121.5SSBP3-206593No protein-
 
Retained intron
---TSL:3
ENST00000533209.5SSBP3-214552No protein-
 
Retained intron
---TSL:4
ENST00000530618.1SSBP3-213524No protein-
 
Retained intron
---TSL:4
Description

citron [Source:MGI Symbol;Acc:MGI:105313]

Gene Synonyms

C030025P15Rik, CRIK-SK, Cit-k, citron kinase, citron-N

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000051704.15Cit-20195142055aaENSMUSP00000062049.9
 
Protein coding
CCDS19597E9QL53 GENCODE basicAPPRIS P2TSL:1
ENSMUST00000141101.5Cit-21267942013aaENSMUSP00000115802.3
 
Protein coding
-F6SBR5 GENCODE basicTSL:5
ENSMUST00000102560.7Cit-20262132070aaENSMUSP00000099620.4
 
Protein coding
-D3YU89 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000112008.9Cit-20360872028aaENSMUSP00000107639.3
 
Protein coding
-D3Z1U0 GENCODE basicTSL:5
ENSMUST00000148245.8Cit-217651181aaENSMUSP00000119769.2
 
Protein coding
-D3Z1K6 TSL:5CDS 3' incomplete
ENSMUST00000137952.8Cit-210571175aaENSMUSP00000122745.2
 
Protein coding
-D3Z477 TSL:5CDS 3' incomplete
ENSMUST00000123736.2Cit-205348723aaENSMUSP00000134875.2
 
Nonsense mediated decay
-H3BJ74 TSL:1CDS 5' incomplete
ENSMUST00000145363.8Cit-2135974No protein-
 
Processed transcript
--TSL:5
ENSMUST00000147479.8Cit-2165016No protein-
 
Processed transcript
--TSL:1
ENSMUST00000139881.8Cit-211699No protein-
 
Processed transcript
--TSL:3
ENSMUST00000153407.2Cit-218293No protein-
 
Processed transcript
--TSL:5
ENSMUST00000136780.2Cit-209287No protein-
 
Processed transcript
--TSL:5
ENSMUST00000122877.8Cit-2044398No protein-
 
Retained intron
--TSL:1
ENSMUST00000134609.2Cit-2083456No protein-
 
Retained intron
--TSL:1
ENSMUST00000146387.8Cit-2142335No protein-
 
Retained intron
--TSL:1
ENSMUST00000147330.8Cit-2151671No protein-
 
Retained intron
--TSL:1
ENSMUST00000202734.2Cit-2191184No protein-
 
Retained intron
--TSL:NA
ENSMUST00000128702.2Cit-207756No protein-
 
Retained intron
--TSL:3
ENSMUST00000127976.3Cit-206561No protein-
 
Retained intron
--TSL:3
Description

long intergenic non-protein coding RNA 511 [Source:HGNC Symbol;Acc:HGNC:43564]

Gene Synonyms

onco-lncRNA-12

Location
Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000650033.1LINC00511-2793766No protein-
 
Retained intron
---
ENST00000650016.1LINC00511-278508No protein-
 
Retained intron
---
ENST00000648631.1LINC00511-2442929No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
ENST00000647652.1LINC00511-2203700No protein-
 
lncRNA
--GENCODE basic
ENST00000582712.2LINC00511-2152586No protein-
 
lncRNA
--GENCODE basicTSL:3
ENST00000647706.2LINC00511-2212532No protein-
 
lncRNA
---
ENST00000649350.1LINC00511-2612527No protein-
 
lncRNA
---
ENST00000648623.2LINC00511-2432522No protein-
 
lncRNA
---
ENST00000650131.3LINC00511-2832292No protein-
 
lncRNA
--GENCODE basic
ENST00000647953.1LINC00511-2252292No protein-
 
lncRNA
--GENCODE basic
ENST00000581549.2LINC00511-2132266No protein-
 
lncRNA
--GENCODE basicTSL:2
ENST00000648401.1LINC00511-2352214No protein-
 
lncRNA
--GENCODE basic
ENST00000649793.2LINC00511-2742208No protein-
 
lncRNA
---
ENST00000650051.1LINC00511-2802207No protein-
 
lncRNA
---
ENST00000650212.1LINC00511-2892174No protein-
 
lncRNA
--GENCODE basic
ENST00000649881.1LINC00511-2762078No protein-
 
lncRNA
---
ENST00000650371.1LINC00511-2942061No protein-
 
lncRNA
---
ENST00000649647.1LINC00511-2722060No protein-
 
lncRNA
---
ENST00000650550.2LINC00511-3022041No protein-
 
lncRNA
--GENCODE basic
ENST00000649366.1LINC00511-2622028No protein-
 
lncRNA
---
ENST00000650313.1LINC00511-2921995No protein-
 
lncRNA
--GENCODE basic
ENST00000649250.1LINC00511-2551978No protein-
 
lncRNA
---
ENST00000647871.2LINC00511-2241958No protein-
 
lncRNA
--GENCODE basic
ENST00000649074.1LINC00511-2521905No protein-
 
lncRNA
--GENCODE basic
ENST00000648952.1LINC00511-2491893No protein-
 
lncRNA
---
ENST00000650483.1LINC00511-2991888No protein-
 
lncRNA
---
ENST00000648520.1LINC00511-2401888No protein-
 
lncRNA
--GENCODE basic
ENST00000648411.1LINC00511-2371843No protein-
 
lncRNA
--GENCODE basic
ENST00000649433.1LINC00511-2641836No protein-
 
lncRNA
--GENCODE basic
ENST00000648297.1LINC00511-2341823No protein-
 
lncRNA
---
ENST00000649311.1LINC00511-2571815No protein-
 
lncRNA
---
ENST00000649172.1LINC00511-2531788No protein-
 
lncRNA
---
ENST00000583460.2LINC00511-2161778No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000649833.1LINC00511-2751772No protein-
 
lncRNA
---
ENST00000648667.1LINC00511-2451751No protein-
 
lncRNA
--GENCODE basic
ENST00000649733.1LINC00511-2731742No protein-
 
lncRNA
---
ENST00000578206.2LINC00511-2051732No protein-
 
lncRNA
--TSL:3
ENST00000453722.6LINC00511-2011716No protein-
 
lncRNA
--TSL:2
ENST00000648069.1LINC00511-2271713No protein-
 
lncRNA
---
ENST00000647593.1LINC00511-2181690No protein-
 
lncRNA
---
ENST00000649489.1LINC00511-2661682No protein-
 
lncRNA
---
ENST00000648176.2LINC00511-2301647No protein-
 
lncRNA
---
ENST00000457958.7LINC00511-2021626No protein-
 
lncRNA
--TSL:1
ENST00000648403.1LINC00511-2361556No protein-
 
lncRNA
--GENCODE basic
ENST00000649343.1LINC00511-2601552No protein-
 
lncRNA
---
ENST00000650602.2LINC00511-3061510No protein-
 
lncRNA
--GENCODE basic
ENST00000648248.1LINC00511-2331468No protein-
 
lncRNA
---
ENST00000650423.1LINC00511-2961455No protein-
 
lncRNA
---
ENST00000648522.1LINC00511-2411351No protein-
 
lncRNA
---
ENST00000650083.1LINC00511-2811329No protein-
 
lncRNA
---
ENST00000648104.2LINC00511-2291264No protein-
 
lncRNA
---
ENST00000649597.1LINC00511-2701206No protein-
 
lncRNA
---
ENST00000650482.1LINC00511-2981202No protein-
 
lncRNA
---
ENST00000649440.2LINC00511-2651159No protein-
 
lncRNA
---
ENST00000650227.1LINC00511-2901126No protein-
 
lncRNA
---
ENST00000649614.1LINC00511-2711098No protein-
 
lncRNA
---
ENST00000649532.1LINC00511-2671045No protein-
 
lncRNA
---
ENST00000649407.1LINC00511-2631045No protein-
 
lncRNA
---
ENST00000648054.1LINC00511-2261027No protein-
 
lncRNA
---
ENST00000650211.1LINC00511-288977No protein-
 
lncRNA
---
ENST00000650419.2LINC00511-295952No protein-
 
lncRNA
---
ENST00000650191.1LINC00511-286951No protein-
 
lncRNA
---
ENST00000649197.1LINC00511-254937No protein-
 
lncRNA
--GENCODE basic
ENST00000577773.3LINC00511-203880No protein-
 
lncRNA
--GENCODE basicTSL:3
ENST00000650289.2LINC00511-291862No protein-
 
lncRNA
---
ENST00000581183.3LINC00511-212860No protein-
 
lncRNA
--TSL:3
ENST00000581801.7LINC00511-214855No protein-
 
lncRNA
--TSL:3
ENST00000648672.2LINC00511-246841No protein-
 
lncRNA
---
ENST00000650476.1LINC00511-297826No protein-
 
lncRNA
---
ENST00000649553.1LINC00511-268819No protein-
 
lncRNA
---
ENST00000649936.1LINC00511-277796No protein-
 
lncRNA
---
ENST00000650161.1LINC00511-284791No protein-
 
lncRNA
---
ENST00000649269.1LINC00511-256789No protein-
 
lncRNA
---
ENST00000648428.1LINC00511-238780No protein-
 
lncRNA
---
ENST00000647611.1LINC00511-219762No protein-
 
lncRNA
---
ENST00000650194.2LINC00511-287762No protein-
 
lncRNA
---
ENST00000648203.1LINC00511-231746No protein-
 
lncRNA
---
ENST00000648907.1LINC00511-248736No protein-
 
lncRNA
---
ENST00000580861.2LINC00511-210701No protein-
 
lncRNA
--GENCODE basicTSL:4
ENST00000650510.1LINC00511-301692No protein-
 
lncRNA
---
ENST00000650180.1LINC00511-285691No protein-
 
lncRNA
---
ENST00000648954.1LINC00511-250689No protein-
 
lncRNA
---
ENST00000580199.7LINC00511-208678No protein-
 
lncRNA
--TSL:3
ENST00000648088.1LINC00511-228669No protein-
 
lncRNA
---
ENST00000648220.1LINC00511-232668No protein-
 
lncRNA
---
ENST00000577828.6LINC00511-204656No protein-
 
lncRNA
--TSL:3
ENST00000650570.1LINC00511-304617No protein-
 
lncRNA
---
ENST00000580500.5LINC00511-209561No protein-
 
lncRNA
--TSL:4
ENST00000650554.1LINC00511-303514No protein-
 
lncRNA
---
ENST00000649332.1LINC00511-259509No protein-
 
lncRNA
---
ENST00000648840.1LINC00511-247502No protein-
 
lncRNA
---
ENST00000647735.1LINC00511-222496No protein-
 
lncRNA
--GENCODE basic
ENST00000580948.1LINC00511-211475No protein-
 
lncRNA
--TSL:3
ENST00000649595.2LINC00511-269471No protein-
 
lncRNA
---
ENST00000579631.2LINC00511-206448No protein-
 
lncRNA
--TSL:2
ENST00000650357.1LINC00511-293325No protein-
 
lncRNA
---
ENST00000649013.1LINC00511-251266No protein-
 
lncRNA
---
ENST00000648559.1LINC00511-242261No protein-
 
lncRNA
---
ENST00000650499.1LINC00511-300231No protein-
 
lncRNA
---
ENST00000649330.1LINC00511-258230No protein-
 
lncRNA
---
ENST00000648500.1LINC00511-239219No protein-
 
lncRNA
---
ENST00000580175.2LINC00511-207208No protein-
 
lncRNA
--TSL:3
ENST00000584749.2LINC00511-217173No protein-
 
lncRNA
--TSL:3
ENST00000650600.1LINC00511-305117No protein-
 
lncRNA
---
ENST00000647850.1LINC00511-223111No protein-
 
lncRNA
---
ENST00000650121.1LINC00511-282108No protein-
 
lncRNA
---
Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:MGI Symbol;Acc:MGI:99603]

Gene Synonyms

2610209L14Rik, Snf2l2, brm

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000025862.15Smarca2-20159211583aaENSMUSP00000025862.8
 
Protein coding
CCDS29720F2Z4A9 GENCODE basicAPPRIS P2TSL:5
ENSMUST00000112637.10Smarca2-2031962236aaENSMUSP00000108256.3
 
Protein coding
CCDS37945Q9D007 GENCODE basicTSL:1
ENSMUST00000208751.2Smarca2-2421846236aaENSMUSP00000146924.2
 
Protein coding
CCDS37945Q9D007 GENCODE basicTSL:5
ENSMUST00000209085.2Smarca2-2461841276aaENSMUSP00000146994.2
 
Protein coding
CCDS84428H3BK47 GENCODE basicTSL:5
ENSMUST00000208589.2Smarca2-2381054236aaENSMUSP00000146890.2
 
Protein coding
CCDS37945Q9D007 GENCODE basicTSL:5
ENSMUST00000176475.9Smarca2-210983276aaENSMUSP00000135248.2
 
Protein coding
CCDS84428H3BK47 GENCODE basicTSL:5
ENSMUST00000176030.8Smarca2-20958621601aaENSMUSP00000135784.2
 
Protein coding
-H3BLH0 GENCODE basicAPPRIS ALT2TSL:5
ENSMUST00000176769.9Smarca2-21657031525aaENSMUSP00000135017.2
 
Protein coding
-H3BJK2 GENCODE basicTSL:5
ENSMUST00000207054.2Smarca2-2202333278aaENSMUSP00000146493.2
 
Protein coding
-A0A140LHP6 GENCODE basicTSL:5
ENSMUST00000208091.2Smarca2-2311140260aaENSMUSP00000146875.2
 
Protein coding
-A0A140LIM0 GENCODE basicTSL:5
ENSMUST00000176698.9Smarca2-213955254aaENSMUSP00000134914.2
 
Protein coding
-H3BKJ3 GENCODE basicTSL:5
ENSMUST00000175791.9Smarca2-204946254aaENSMUSP00000135412.2
 
Protein coding
-H3BKJ3 GENCODE basicTSL:3
ENSMUST00000208027.2Smarca2-230898296aaENSMUSP00000146392.2
 
Protein coding
-A0A140LHF4 TSL:5CDS 3' incomplete
ENSMUST00000207118.2Smarca2-221834228aaENSMUSP00000146379.2
 
Protein coding
-A0A140LHE2 TSL:3CDS 3' incomplete
ENSMUST00000208674.2Smarca2-239800267aaENSMUSP00000146770.2
 
Protein coding
-A0A140LID0 TSL:5CDS 5' and 3' incomplete
ENSMUST00000175842.4Smarca2-205779211aaENSMUSP00000135800.3
 
Protein coding
-H3BLI4 TSL:2CDS 3' incomplete
ENSMUST00000207812.2Smarca2-227756200aaENSMUSP00000146616.2
 
Protein coding
-A0A140LHZ8 TSL:5CDS 3' incomplete
ENSMUST00000208705.2Smarca2-240745170aaENSMUSP00000146971.2
 
Protein coding
-A0A140LIV3 TSL:5CDS 3' incomplete
ENSMUST00000208186.2Smarca2-233740244aaENSMUSP00000146632.2
 
Protein coding
-A0A140LI14 TSL:5CDS 3' incomplete
ENSMUST00000207832.2Smarca2-228712229aaENSMUSP00000146919.2
 
Protein coding
-A0A140LIQ9 TSL:5CDS 3' incomplete
ENSMUST00000177252.9Smarca2-218709201aaENSMUSP00000134995.3
 
Protein coding
-H3BJI1 TSL:5CDS 3' incomplete
ENSMUST00000175953.3Smarca2-207692149aaENSMUSP00000135042.3
 
Protein coding
-H3BJM2 TSL:3CDS 3' incomplete
ENSMUST00000208303.2Smarca2-235683228aaENSMUSP00000147173.2
 
Protein coding
-A0A140LJD7 TSL:5CDS 5' and 3' incomplete
ENSMUST00000176584.2Smarca2-212645173aaENSMUSP00000135344.2
 
Protein coding
-H3BKD2 TSL:3CDS 3' incomplete
ENSMUST00000208806.2Smarca2-24364068aaENSMUSP00000146442.2
 
Protein coding
-A0A140LHJ8 TSL:5CDS 3' incomplete
ENSMUST00000208712.2Smarca2-241630169aaENSMUSP00000147244.2
 
Protein coding
-A0A140LJK1 TSL:5CDS 3' incomplete
ENSMUST00000208163.2Smarca2-23242178aaENSMUSP00000146859.2
 
Protein coding
-A0A140LIK7 TSL:5CDS 3' incomplete
ENSMUST00000099537.9Smarca2-20259131510aaENSMUSP00000097135.3
 
Nonsense mediated decay
-E9QAB8 TSL:1
ENSMUST00000176731.3Smarca2-2152018299aaENSMUSP00000135460.3
 
Nonsense mediated decay
-H3BKN5 TSL:5CDS 5' incomplete
ENSMUST00000208915.2Smarca2-244191472aaENSMUSP00000146432.2
 
Nonsense mediated decay
-A0A140LI08 TSL:1
ENSMUST00000208541.2Smarca2-237112272aaENSMUSP00000146626.2
 
Nonsense mediated decay
-A0A140LI08 TSL:5
ENSMUST00000208226.2Smarca2-23475745aaENSMUSP00000146630.2
 
Nonsense mediated decay
-A0A140LI12 TSL:5
ENSMUST00000207535.2Smarca2-22650393aaENSMUSP00000146464.2
 
Nonsense mediated decay
-A0A140LHL7 TSL:5CDS 5' incomplete
ENSMUST00000175935.8Smarca2-2061584No protein-
 
Processed transcript
--TSL:1
ENSMUST00000177116.8Smarca2-217968No protein-
 
Processed transcript
--TSL:3
ENSMUST00000207226.2Smarca2-223876No protein-
 
Processed transcript
--TSL:5
ENSMUST00000177484.3Smarca2-219736No protein-
 
Processed transcript
--TSL:3
ENSMUST00000207944.2Smarca2-229681No protein-
 
Processed transcript
--TSL:5
ENSMUST00000207380.2Smarca2-224613No protein-
 
Processed transcript
--TSL:5
ENSMUST00000207418.2Smarca2-225576No protein-
 
Processed transcript
--TSL:3
ENSMUST00000176494.2Smarca2-211426No protein-
 
Processed transcript
--TSL:3
ENSMUST00000207175.2Smarca2-2222838No protein-
 
Retained intron
--TSL:NA
ENSMUST00000208984.2Smarca2-2451924No protein-
 
Retained intron
--TSL:NA
ENSMUST00000208378.2Smarca2-2361133No protein-
 
Retained intron
--TSL:5
ENSMUST00000176700.8Smarca2-214867No protein-
 
Retained intron
--TSL:3
ENSMUST00000176019.2Smarca2-208661No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 9, Coding exons: 8, Transcript length: 898 bps, Translation length: 296 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 3' incomplete

Version

ENSMUST00000208027.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays

    HASH(0x31bea318)