Mouse (GRCm39)
Description

choline kinase alpha [Source:MGI Symbol;Acc:MGI:107760]

Gene Synonyms

CK/EK-alpha, Chk, ChoK, EtnK-alpha, choline/ethanolamine kinase alpha

Location
About this transcript

This transcript has 11 exons, is annotated with 11 domains and features, is associated with 2411 variant alleles and maps to 284 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000025760.13Chka-2012319453aaENSMUSP00000025760.7
 
Protein coding
CCDS70913O54804 Ensembl CanonicalGENCODE basicTSL:5
ENSMUST00000072055.13Chka-2022549435aaENSMUSP00000071933.7
 
Protein coding
CCDS29400O54804-2 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000125640.2Chka-206689230aaENSMUSP00000119493.2
 
Protein coding
F6S062 TSL:5CDS 5' and 3' incomplete
ENSMUST00000128694.8Chka-2092683164aaENSMUSP00000119919.2
 
Nonsense mediated decay
Q5J2U5 TSL:1
ENSMUST00000153343.2Chka-21374476aaENSMUSP00000115861.2
 
Nonsense mediated decay
D6RG40 TSL:3
ENSMUST00000139655.8Chka-210721163aaENSMUSP00000116427.2
 
Nonsense mediated decay
F7AYX1 TSL:5CDS 5' incomplete
ENSMUST00000127544.2Chka-208547No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000148325.8Chka-212275No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000125859.8Chka-2074652No protein-
 
Retained intron
-TSL:2
ENSMUST00000154467.8Chka-2143605No protein-
 
Retained intron
-TSL:2
ENSMUST00000124219.2Chka-2033574No protein-
 
Retained intron
-TSL:1
ENSMUST00000125411.8Chka-2051627No protein-
 
Retained intron
-TSL:2
ENSMUST00000125013.2Chka-204875No protein-
 
Retained intron
-TSL:2
ENSMUST00000146463.8Chka-211600No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,549 bps, Translation length: 435 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O54804

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29400

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000072055.13

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.