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EnsemblEnsembl Home
Description

dual specificity phosphatase 13 [Source:HGNC Symbol;Acc:HGNC:19681]

Gene Synonyms

BEDP, DUSP13A, DUSP13B, FLJ32450, TMDP

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
DUSP13-208ENST00000478873.71320334aaENSP00000475626.1
 
Protein coding
CCDS86105U3KQ82 NM_001363514.2MANE Select v0.93Ensembl CanonicalGENCODE basicTSL:5
DUSP13-203ENST00000372702.71778188aaENSP00000361787.2
 
Protein coding
CCDS53542Q6B8I1-1 -GENCODE basicTSL:1
DUSP13-210ENST00000491677.61770198aaENSP00000436312.3
 
Protein coding
CCDS7346Q9UII6-1 -GENCODE basicAPPRIS P4TSL:1
DUSP13-214ENST00000607131.51019198aaENSP00000475801.2
 
Protein coding
CCDS7346Q9UII6-1 -GENCODE basicAPPRIS P4TSL:1
DUSP13-206ENST00000472493.6920198aaENSP00000444580.1
 
Protein coding
CCDS7346Q9UII6-1 -GENCODE basicAPPRIS P4TSL:1
DUSP13-202ENST00000372700.7781248aaENSP00000361785.2
 
Protein coding
CCDS31224Q9UII6-4 -GENCODE basicAPPRIS ALT2TSL:3
DUSP13-212ENST00000605915.51015220aaENSP00000475675.1
 
Protein coding
-U3KQA1 -GENCODE basicTSL:5
DUSP13-215ENST00000607487.5780260aaENSP00000475851.1
 
Protein coding
-U3KQG1 -TSL:5CDS 5' and 3' incomplete
DUSP13-205ENST00000464872.5684147aaENSP00000434041.1
 
Protein coding
-E9PSD4 -GENCODE basicTSL:3
DUSP13-207ENST00000473072.2628193aaENSP00000475732.1
 
Protein coding
-U3KQB7 -TSL:5CDS 3' incomplete
DUSP13-209ENST00000479884.61556166aaENSP00000474298.1
 
Nonsense mediated decay
-Q6B8I1-4 -TSL:2
DUSP13-211ENST00000494588.2141192aaENSP00000474689.1
 
Nonsense mediated decay
-Q6B8I1-3 -TSL:2
DUSP13-204ENST00000394707.7112967aaENSP00000452702.2
 
Nonsense mediated decay
-Q6B8I1-2 -TSL:2
DUSP13-201ENST00000308475.10111060aaENSP00000311051.6
 
Nonsense mediated decay
-Q6B8I1-5 -TSL:1
DUSP13-213ENST00000607009.1544No protein-
 
Processed transcript
---TSL:4
Description

TATA-box binding protein associated factor, RNA polymerase I, D [Source:MGI Symbol;Acc:MGI:1922566]

Gene Synonyms

4930553M18Rik, Josd3, TAF(I)41, TAFI41

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Taf1d-201ENSMUST00000034415.61148322aaENSMUSP00000034415.6
 
Protein coding
CCDS22836Q9D4V4-1 GENCODE basicAPPRIS P3TSL:1
Taf1d-202ENSMUST00000164079.91005290aaENSMUSP00000129141.2
 
Protein coding
CCDS52726Q9D4V4-2 GENCODE basicAPPRIS ALT2TSL:1
Taf1d-211ENSMUST00000215124.2629153aaENSMUSP00000150723.2
 
Protein coding
-A0A1L1SUD1 TSL:3CDS 3' incomplete
Taf1d-213ENSMUST00000216109.261292aaENSMUSP00000150890.2
 
Protein coding
-A0A1L1SUU1 TSL:5CDS 3' incomplete
Taf1d-209ENSMUST00000214316.235323aaENSMUSP00000149380.2
 
Protein coding
-A0A1L1SRB1 TSL:5CDS 5' incomplete
Taf1d-207ENSMUST00000214054.23126288aaENSMUSP00000150937.2
 
Nonsense mediated decay
-Q9D4V4-3 TSL:5
Taf1d-204ENSMUST00000213763.21216288aaENSMUSP00000150356.2
 
Nonsense mediated decay
-Q9D4V4-3 TSL:1
Taf1d-216ENSMUST00000216825.21210288aaENSMUSP00000149377.2
 
Nonsense mediated decay
-Q9D4V4-3 TSL:1
Taf1d-212ENSMUST00000215749.2651122aaENSMUSP00000150491.2
 
Nonsense mediated decay
-A0A1L1STW1 TSL:3CDS 5' incomplete
Taf1d-206ENSMUST00000214045.2491No protein-
 
Processed transcript
--TSL:3
Taf1d-203ENSMUST00000213235.24881No protein-
 
Retained intron
--TSL:2
Taf1d-208ENSMUST00000214221.22818No protein-
 
Retained intron
--TSL:1
Taf1d-205ENSMUST00000213923.22339No protein-
 
Retained intron
--TSL:2
Taf1d-210ENSMUST00000214899.21717No protein-
 
Retained intron
--TSL:NA
Taf1d-214ENSMUST00000216256.21702No protein-
 
Retained intron
--TSL:NA
Taf1d-215ENSMUST00000216768.2502No protein-
 
Retained intron
--TSL:5
Description

galectin 9C [Source:HGNC Symbol;Acc:HGNC:33874]

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
LGALS9C-222ENST00000639265.21715356aaENSP00000491587.1
 
Protein coding
-Q6DKI2 -Ensembl CanonicalGENCODE basic
LGALS9C-218ENST00000638766.11602323aaENSP00000492141.1
 
Protein coding
-J3KSY2 -GENCODE basic
LGALS9C-230ENST00000640841.11378246aaENSP00000492382.1
 
Protein coding
-J3QR96 -GENCODE basic
LGALS9C-227ENST00000640474.11104234aaENSP00000491939.1
 
Protein coding
-J3KT17 -GENCODE basic
LGALS9C-226ENST00000640466.1615175aaENSP00000492402.1
 
Protein coding
-J3QSH0 -CDS 3' incomplete
LGALS9C-224ENST00000640023.1151575aaENSP00000492784.1
 
Nonsense mediated decay
-J3KRF0 --
LGALS9C-225ENST00000640356.1150675aaENSP00000491799.1
 
Nonsense mediated decay
-J3KRF0 --
LGALS9C-229ENST00000640645.1111735aaENSP00000491309.1
 
Nonsense mediated decay
-J3QKS2 --
LGALS9C-219ENST00000638896.138153aaENSP00000491219.1
 
Nonsense mediated decay
-J3KSV0 -CDS 5' incomplete
LGALS9C-223ENST00000639415.1447No protein-
 
Processed transcript
----
LGALS9C-216ENST00000638447.12947No protein-
 
Retained intron
----
LGALS9C-221ENST00000639218.12354No protein-
 
Retained intron
----
LGALS9C-217ENST00000638740.1555No protein-
 
Retained intron
----
LGALS9C-228ENST00000640535.1549No protein-
 
Retained intron
----
LGALS9C-220ENST00000639050.1492No protein-
 
Retained intron
----
Description

SOX2 overlapping transcript [Source:HGNC Symbol;Acc:HGNC:20209]

Gene Synonyms

DKFZp761J1324, NCRNA00043, SOX2OT

NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
SOX2-OT-294ENST00000660576.14101No protein-
 
lncRNA
--Ensembl Canonical
SOX2-OT-292ENST00000656613.14289No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-302ENST00000670501.14282No protein-
 
lncRNA
---
SOX2-OT-298ENST00000665187.14263No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-303ENST00000671456.14240No protein-
 
lncRNA
---
SOX2-OT-293ENST00000657986.14162No protein-
 
lncRNA
---
SOX2-OT-282ENST00000646698.14109No protein-
 
lncRNA
---
SOX2-OT-234ENST00000600801.74085No protein-
 
lncRNA
--TSL:5
SOX2-OT-295ENST00000661842.14077No protein-
 
lncRNA
---
SOX2-OT-291ENST00000654649.14032No protein-
 
lncRNA
---
SOX2-OT-225ENST00000596250.73985No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-218ENST00000498731.63964No protein-
 
lncRNA
--TSL:1
SOX2-OT-275ENST00000645583.23870No protein-
 
lncRNA
---
SOX2-OT-284ENST00000646841.23868No protein-
 
lncRNA
---
SOX2-OT-290ENST00000654538.13844No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-296ENST00000665033.13529No protein-
 
lncRNA
---
SOX2-OT-297ENST00000665112.13462No protein-
 
lncRNA
---
SOX2-OT-287ENST00000647055.13274No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-207ENST00000476964.63226No protein-
 
lncRNA
--GENCODE basicTSL:1
SOX2-OT-286ENST00000647034.12920No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-214ENST00000493116.62779No protein-
 
lncRNA
--TSL:4
SOX2-OT-267ENST00000643236.22454No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-299ENST00000665485.12297No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-263ENST00000642685.12276No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-260ENST00000642301.22271No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-213ENST00000492337.62184No protein-
 
lncRNA
--TSL:2
SOX2-OT-300ENST00000667332.12112No protein-
 
lncRNA
---
SOX2-OT-279ENST00000646296.22094No protein-
 
lncRNA
---
SOX2-OT-262ENST00000642652.22042No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-285ENST00000646949.21980No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-269ENST00000643769.11967No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-272ENST00000644582.11884No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-203ENST00000466034.71772No protein-
 
lncRNA
--TSL:1
SOX2-OT-281ENST00000646683.11766No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-271ENST00000644358.11703No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-248ENST00000628810.21675No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-268ENST00000643667.11622No protein-
 
lncRNA
---
SOX2-OT-274ENST00000645423.21583No protein-
 
lncRNA
---
SOX2-OT-259ENST00000642218.11500No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-265ENST00000642922.11468No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-264ENST00000642823.11444No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-280ENST00000646508.11390No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-226ENST00000597347.51342No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-261ENST00000642429.11279No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-273ENST00000644732.11242No protein-
 
lncRNA
---
SOX2-OT-215ENST00000493521.51239No protein-
 
lncRNA
--GENCODE basicTSL:3
SOX2-OT-289ENST00000647552.11238No protein-
 
lncRNA
---
SOX2-OT-276ENST00000645960.11199No protein-
 
lncRNA
---
SOX2-OT-209ENST00000485035.31162No protein-
 
lncRNA
--GENCODE basicTSL:4
SOX2-OT-270ENST00000644304.11115No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-266ENST00000643131.21097No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-288ENST00000647179.11068No protein-
 
lncRNA
---
SOX2-OT-212ENST00000491282.61040No protein-
 
lncRNA
--TSL:1
SOX2-OT-255ENST00000630482.21012No protein-
 
lncRNA
--TSL:5
SOX2-OT-283ENST00000646712.1989No protein-
 
lncRNA
---
SOX2-OT-206ENST00000476125.5979No protein-
 
lncRNA
--TSL:3
SOX2-OT-258ENST00000631025.2954No protein-
 
lncRNA
--TSL:5
SOX2-OT-256ENST00000630553.1905No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-208ENST00000477928.1902No protein-
 
lncRNA
--TSL:2
SOX2-OT-242ENST00000627530.3873No protein-
 
lncRNA
--TSL:5
SOX2-OT-228ENST00000597828.5864No protein-
 
lncRNA
--TSL:5
SOX2-OT-222ENST00000595084.3850No protein-
 
lncRNA
--TSL:5
SOX2-OT-244ENST00000628211.2847No protein-
 
lncRNA
--TSL:5
SOX2-OT-240ENST00000626948.2836No protein-
 
lncRNA
--TSL:5
SOX2-OT-231ENST00000599082.2836No protein-
 
lncRNA
--TSL:5
SOX2-OT-247ENST00000628496.3798No protein-
 
lncRNA
--TSL:5
SOX2-OT-278ENST00000646056.1796No protein-
 
lncRNA
---
SOX2-OT-232ENST00000600386.6789No protein-
 
lncRNA
--TSL:5
SOX2-OT-241ENST00000627501.3772No protein-
 
lncRNA
--TSL:5
SOX2-OT-233ENST00000600778.3762No protein-
 
lncRNA
--TSL:5
SOX2-OT-249ENST00000629112.3759No protein-
 
lncRNA
--TSL:5
SOX2-OT-220ENST00000593549.6753No protein-
 
lncRNA
--TSL:5
SOX2-OT-210ENST00000487240.3751No protein-
 
lncRNA
--TSL:5
SOX2-OT-257ENST00000630887.3745No protein-
 
lncRNA
--TSL:5
SOX2-OT-245ENST00000628343.3743No protein-
 
lncRNA
--TSL:5
SOX2-OT-239ENST00000626802.2737No protein-
 
lncRNA
--TSL:5
SOX2-OT-224ENST00000595313.5716No protein-
 
lncRNA
--TSL:5
SOX2-OT-243ENST00000627738.1692No protein-
 
lncRNA
--TSL:5
SOX2-OT-252ENST00000629781.3690No protein-
 
lncRNA
--TSL:5
SOX2-OT-253ENST00000629830.3677No protein-
 
lncRNA
--TSL:5
SOX2-OT-221ENST00000594942.5675No protein-
 
lncRNA
--TSL:5
SOX2-OT-238ENST00000626619.2660No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-301ENST00000668295.1654No protein-
 
lncRNA
---
SOX2-OT-254ENST00000630150.2649No protein-
 
lncRNA
--TSL:5
SOX2-OT-227ENST00000597651.6626No protein-
 
lncRNA
--TSL:5
SOX2-OT-237ENST00000626299.3619No protein-
 
lncRNA
--TSL:5
SOX2-OT-201ENST00000460739.5609No protein-
 
lncRNA
--TSL:4
SOX2-OT-223ENST00000595287.1581No protein-
 
lncRNA
--TSL:5
SOX2-OT-216ENST00000497122.5578No protein-
 
lncRNA
--TSL:4
SOX2-OT-250ENST00000629273.2575No protein-
 
lncRNA
--TSL:5
SOX2-OT-251ENST00000629552.2572No protein-
 
lncRNA
--TSL:5
SOX2-OT-202ENST00000461063.6566No protein-
 
lncRNA
--TSL:3
SOX2-OT-204ENST00000469278.5561No protein-
 
lncRNA
--TSL:4
SOX2-OT-217ENST00000498226.5560No protein-
 
lncRNA
--TSL:4
SOX2-OT-229ENST00000598474.4512No protein-
 
lncRNA
--TSL:5
SOX2-OT-236ENST00000625581.2495No protein-
 
lncRNA
--TSL:5
SOX2-OT-235ENST00000600962.6469No protein-
 
lncRNA
--TSL:5
SOX2-OT-219ENST00000593330.1468No protein-
 
lncRNA
--TSL:3
SOX2-OT-205ENST00000472856.1454No protein-
 
lncRNA
--TSL:2
SOX2-OT-246ENST00000628347.1445No protein-
 
lncRNA
--TSL:5
SOX2-OT-277ENST00000645983.1392No protein-
 
lncRNA
---
SOX2-OT-211ENST00000490005.2383No protein-
 
lncRNA
--TSL:2
SOX2-OT-230ENST00000598867.1348No protein-
 
lncRNA
--TSL:5
Description

neurexin I [Source:MGI Symbol;Acc:MGI:1096391]

Gene Synonyms

1700062G21Rik, 9330127H16Rik, A230068P09Rik, alpha-latrotoxin receptor (calcium-dependent), neurexin I alpha, neurexin I beta

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Nrxn1-207ENSMUST00000160844.1093091507aaENSMUSP00000125407.4
 
Protein coding
CCDS57113Q9CS84-2 GENCODE basicAPPRIS P4TSL:1
Nrxn1-206ENSMUST00000160800.956831495aaENSMUSP00000124561.3
 
Protein coding
CCDS57112E0CY11 GENCODE basicAPPRIS ALT1TSL:1
Nrxn1-204ENSMUST00000159778.83414438aaENSMUSP00000125561.3
 
Protein coding
CCDS84340E0CZA5 GENCODE basicTSL:5
Nrxn1-217ENSMUST00000174337.83021468aaENSMUSP00000133724.3
 
Protein coding
CCDS84341P0DI97-1 GENCODE basicTSL:5
Nrxn1-213ENSMUST00000172466.82477465aaENSMUSP00000134402.3
 
Protein coding
CCDS84342A0A0H2UH29 GENCODE basicTSL:5
Nrxn1-225ENSMUST00000197268.52280139aaENSMUSP00000142815.2
 
Protein coding
CCDS84339Q9CS84-6 GENCODE basicTSL:3
Nrxn1-215ENSMUST00000173917.81439142aaENSMUSP00000133389.3
 
Protein coding
CCDS84338G3UWQ9 GENCODE basicTSL:2
Nrxn1-202ENSMUST00000072671.1481181496aaENSMUSP00000072458.8
 
Protein coding
-Q9CS84-4 GENCODE basicAPPRIS ALT1TSL:5
Nrxn1-216ENSMUST00000174331.862821477aaENSMUSP00000133491.2
 
Protein coding
-Q9CS84-5 GENCODE basicTSL:5
Nrxn1-209ENSMUST00000161402.1049531514aaENSMUSP00000124116.4
 
Protein coding
-Q9CS84-1 GENCODE basicTSL:5
Nrxn1-201ENSMUST00000054059.1546971499aaENSMUSP00000057294.9
 
Protein coding
-Q9CS84-3 GENCODE basicAPPRIS ALT1TSL:5
Nrxn1-214ENSMUST00000173222.285975aaENSMUSP00000146701.2
 
Protein coding
-A0A140LI71 GENCODE basicTSL:1
Nrxn1-222ENSMUST00000196559.5706172aaENSMUSP00000142891.2
 
Protein coding
-A0A0G2JES8 TSL:3CDS 5' incomplete
Nrxn1-218ENSMUST00000176118.2641213aaENSMUSP00000135241.2
 
Protein coding
-H3BK41 TSL:5CDS 5' and 3' incomplete
Nrxn1-223ENSMUST00000197104.2560186aaENSMUSP00000142621.2
 
Protein coding
-A0A0G2JE40 TSL:5CDS 5' and 3' incomplete
Nrxn1-224ENSMUST00000197224.2506169aaENSMUSP00000142650.2
 
Protein coding
-A0A0G2JE65 TSL:5CDS 5' and 3' incomplete
Nrxn1-210ENSMUST00000161637.83306No protein-
 
Processed transcript
--TSL:1
Nrxn1-220ENSMUST00000177342.3981No protein-
 
Processed transcript
--TSL:5
Nrxn1-219ENSMUST00000176918.2417No protein-
 
Processed transcript
--TSL:5
Nrxn1-208ENSMUST00000161102.94813No protein-
 
Retained intron
--TSL:2
Nrxn1-211ENSMUST00000162002.24299No protein-
 
Retained intron
--TSL:1
Nrxn1-212ENSMUST00000162227.33719No protein-
 
Retained intron
--TSL:1
Nrxn1-205ENSMUST00000160467.83097No protein-
 
Retained intron
--TSL:1
Nrxn1-203ENSMUST00000159419.23036No protein-
 
Retained intron
--TSL:1
Nrxn1-226ENSMUST00000198899.22797No protein-
 
Retained intron
--TSL:NA
Nrxn1-221ENSMUST00000196269.5406No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 4, Coding exons: 4, Transcript length: 706 bps, Translation length: 172 residues

Transcript Support Level (TSL)

TSL:3

Incomplete CDS

CDS 5' incomplete

Version

ENSMUST00000196559.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays

    HASH(0x24ca5e50)