Transcript: ENSMUST00000024832.9 Rsph1-201

Description

radial spoke head 1 homolog (Chlamydomonas) [Source:MGI Symbol;Acc:MGI:1194909]

Gene Synonyms

MCA, Tsga2, meichroacidin

Location

Chromosome 17: 31,473,993-31,496,357 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 30 domains and features, is associated with 2132 variant alleles and maps to 136 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000024033.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000024832.9	Rsph1-201	1191	301aa	ENSMUSP00000024832.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28604	Q3YEA4 Q8VIG3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000236379.2	Rsph1-203	1190	284aa	ENSMUSP00000157620.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494B9F6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000235144.2	Rsph1-202	1026	263aa	ENSMUSP00000158337.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q3YEA0	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,191 bps, Translation length: 301 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8VIG3

CCDS

This transcript is a member of the Mouse CCDS set: CCDS28604

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000024832.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000024832.9 Rsph1-201

Summary

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Transcript: ENSMUST00000024832.9 Rsph1-201

Summary

About Us

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