Mouse (GRCm39)
Description

general transcription factor II I repeat domain-containing 1 [Source:MGI Symbol;Acc:MGI:1861942]

Gene Synonyms

BEN, Cream1, ESTM9, GTF3, MusTRD1, WBSCR11, binding factor for early enhancer

About this transcript

This transcript has 30 exons, is annotated with 37 domains and features, is associated with 6391 variant alleles and maps to 141 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000100652.10Gtf2ird1-20436931104aaENSMUSP00000098217.4
 
Protein coding
CCDS39307Q9JI57 Ensembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000073161.12Gtf2ird1-20135721072aaENSMUSP00000072904.6
 
Protein coding
CCDS39305Q9JI57-2 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000171794.9Gtf2ird1-20935241045aaENSMUSP00000129392.3
 
Protein coding
CCDS39304Q6PD35 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000202554.4Gtf2ird1-22935141058aaENSMUSP00000143809.2
 
Protein coding
CCDS84967Q9JI57-6 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000100650.10Gtf2ird1-20334871077aaENSMUSP00000098215.4
 
Protein coding
CCDS39306Q9JI57-5 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000111244.5Gtf2ird1-20634611045aaENSMUSP00000106875.2
 
Protein coding
CCDS39304Q6PD35 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000074114.12Gtf2ird1-20233301001aaENSMUSP00000073752.6
 
Protein coding
CCDS51657Q9JI57-8 GENCODE basicTSL:1
ENSMUST00000111245.9Gtf2ird1-20732991026aaENSMUSP00000106876.3
 
Protein coding
CCDS39302Q9JI57-7 GENCODE basicAPPRIS P2TSL:1
ENSMUST00000167084.9Gtf2ird1-2083283969aaENSMUSP00000132882.3
 
Protein coding
Q9JI57-10 GENCODE basicTSL:5
ENSMUST00000100654.10Gtf2ird1-2053156974aaENSMUSP00000098219.4
 
Protein coding
CCDS39303Q9JI57-9 GENCODE basicTSL:1
ENSMUST00000200944.4Gtf2ird1-2123133969aaENSMUSP00000143848.2
 
Protein coding
CCDS80420Q9JI57-10 GENCODE basicTSL:1
ENSMUST00000202280.4Gtf2ird1-2243052942aaENSMUSP00000143897.2
 
Protein coding
A0A0J9YTX7 GENCODE basicTSL:5
ENSMUST00000202829.4Gtf2ird1-2311080345aaENSMUSP00000144604.2
 
Protein coding
Q80ZG9 TSL:1CDS 5' incomplete
ENSMUST00000201441.4Gtf2ird1-213786262aaENSMUSP00000144447.2
 
Protein coding
A0A0J9YV21 TSL:5CDS 5' and 3' incomplete
ENSMUST00000201704.2Gtf2ird1-219751251aaENSMUSP00000144373.2
 
Protein coding
A0A0J9YUW7 TSL:3CDS 5' and 3' incomplete
ENSMUST00000202104.4Gtf2ird1-220676167aaENSMUSP00000144203.2
 
Protein coding
A0A0J9YUI9 TSL:5CDS 5' incomplete
ENSMUST00000202165.4Gtf2ird1-221579193aaENSMUSP00000144420.2
 
Protein coding
A0A0J9YV00 TSL:3CDS 5' and 3' incomplete
ENSMUST00000201447.4Gtf2ird1-214579193aaENSMUSP00000144222.2
 
Protein coding
A0A0J9YUK2 TSL:3CDS 5' and 3' incomplete
ENSMUST00000201647.2Gtf2ird1-21836199aaENSMUSP00000144391.2
 
Protein coding
A0A0J9YUX8 TSL:5CDS 3' incomplete
ENSMUST00000202321.4Gtf2ird1-225143947aaENSMUSP00000143948.2
 
Nonsense mediated decay
A0A0J9YU11 TSL:5CDS 5' incomplete
ENSMUST00000200798.4Gtf2ird1-21085774aaENSMUSP00000144521.2
 
Nonsense mediated decay
A0A0J9YV72 TSL:5CDS 5' incomplete
ENSMUST00000201495.4Gtf2ird1-21580138aaENSMUSP00000144003.2
 
Nonsense mediated decay
A0A0J9YU48 TSL:5CDS 5' incomplete
ENSMUST00000201526.4Gtf2ird1-21660466aaENSMUSP00000144502.2
 
Nonsense mediated decay
A0A0J9YV59 TSL:5CDS 5' incomplete
ENSMUST00000202763.2Gtf2ird1-230608No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000202335.4Gtf2ird1-2273068No protein-
 
Retained intron
-TSL:1
ENSMUST00000202414.4Gtf2ird1-2282506No protein-
 
Retained intron
-TSL:1
ENSMUST00000202202.2Gtf2ird1-222810No protein-
 
Retained intron
-TSL:3
ENSMUST00000200817.2Gtf2ird1-211802No protein-
 
Retained intron
-TSL:5
ENSMUST00000202334.4Gtf2ird1-226741No protein-
 
Retained intron
-TSL:2
ENSMUST00000202268.4Gtf2ird1-223630No protein-
 
Retained intron
-TSL:3
ENSMUST00000201608.2Gtf2ird1-217288No protein-
 
Retained intron
-TSL:5
Statistics

Exons: 30, Coding exons: 29, Transcript length: 3,693 bps, Translation length: 1,104 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9JI57

CCDS

This transcript is a member of the Mouse CCDS set: CCDS39307

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000100652.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.