Mouse (GRCm39)
Description

pre-mRNA processing factor 40B [Source:MGI Symbol;Acc:MGI:1925583]

Gene Synonyms

2610317D23Rik

Location
About this transcript

This transcript has 6 exons, is associated with 546 variant alleles and maps to 157 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000145482.8Prpf40b-2123308873aaENSMUSP00000115869.2
 
Protein coding
CCDS27818A0A0R4J1S2 Ensembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000118287.9Prpf40b-2023129870aaENSMUSP00000113282.3
 
Protein coding
E9QP07 GENCODE basicAPPRIS P4TSL:1
ENSMUST00000136980.8Prpf40b-2083047857aaENSMUSP00000122649.2
 
Protein coding
D3Z4N6 GENCODE basicAPPRIS ALT2TSL:5
ENSMUST00000023745.13Prpf40b-2012619852aaENSMUSP00000023745.7
 
Protein coding
E9QMI6 TSL:5CDS 3' incomplete
ENSMUST00000150636.8Prpf40b-213892189aaENSMUSP00000119295.2
 
Protein coding
F6QF44 TSL:3CDS 5' incomplete
ENSMUST00000134034.8Prpf40b-207891257aaENSMUSP00000120030.2
 
Protein coding
F6XW22 TSL:3CDS 5' incomplete
ENSMUST00000126955.2Prpf40b-20478086aaENSMUSP00000123527.2
 
Protein coding
F6W479 TSL:5CDS 5' incomplete
ENSMUST00000128352.8Prpf40b-205658136aaENSMUSP00000119556.2
 
Protein coding
D3Z1Y9 TSL:3CDS 3' incomplete
ENSMUST00000140806.8Prpf40b-211100092aaENSMUSP00000121260.2
 
Nonsense mediated decay
D6RD12 TSL:5
ENSMUST00000150641.8Prpf40b-2144065No protein-
 
Retained intron
-TSL:2
ENSMUST00000138036.8Prpf40b-2092993No protein-
 
Retained intron
-TSL:2
ENSMUST00000130575.8Prpf40b-2062740No protein-
 
Retained intron
-TSL:2
ENSMUST00000139330.8Prpf40b-210906No protein-
 
Retained intron
-TSL:2
ENSMUST00000153692.2Prpf40b-215818No protein-
 
Retained intron
-TSL:5
ENSMUST00000124275.2Prpf40b-203590No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 6, Coding exons: 0, Transcript length: 818 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000153692.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.