Mouse (GRCm39)
Description

pre-mRNA processing factor 40B [Source:MGI Symbol;Acc:MGI:1925583]

Gene Synonyms

2610317D23Rik

Location
About this transcript

This transcript has 26 exons, is annotated with 67 domains and features, is associated with 1153 variant alleles and maps to 243 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000145482.8Prpf40b-2123308873aaENSMUSP00000115869.2
 
Protein coding
CCDS27818A0A0R4J1S2 Ensembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000118287.9Prpf40b-2023129870aaENSMUSP00000113282.3
 
Protein coding
E9QP07 GENCODE basicAPPRIS P4TSL:1
ENSMUST00000136980.8Prpf40b-2083047857aaENSMUSP00000122649.2
 
Protein coding
D3Z4N6 GENCODE basicAPPRIS ALT2TSL:5
ENSMUST00000023745.13Prpf40b-2012619852aaENSMUSP00000023745.7
 
Protein coding
E9QMI6 TSL:5CDS 3' incomplete
ENSMUST00000150636.8Prpf40b-213892189aaENSMUSP00000119295.2
 
Protein coding
F6QF44 TSL:3CDS 5' incomplete
ENSMUST00000134034.8Prpf40b-207891257aaENSMUSP00000120030.2
 
Protein coding
F6XW22 TSL:3CDS 5' incomplete
ENSMUST00000126955.2Prpf40b-20478086aaENSMUSP00000123527.2
 
Protein coding
F6W479 TSL:5CDS 5' incomplete
ENSMUST00000128352.8Prpf40b-205658136aaENSMUSP00000119556.2
 
Protein coding
D3Z1Y9 TSL:3CDS 3' incomplete
ENSMUST00000140806.8Prpf40b-211100092aaENSMUSP00000121260.2
 
Nonsense mediated decay
D6RD12 TSL:5
ENSMUST00000150641.8Prpf40b-2144065No protein-
 
Retained intron
-TSL:2
ENSMUST00000138036.8Prpf40b-2092993No protein-
 
Retained intron
-TSL:2
ENSMUST00000130575.8Prpf40b-2062740No protein-
 
Retained intron
-TSL:2
ENSMUST00000139330.8Prpf40b-210906No protein-
 
Retained intron
-TSL:2
ENSMUST00000153692.2Prpf40b-215818No protein-
 
Retained intron
-TSL:5
ENSMUST00000124275.2Prpf40b-203590No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 26, Coding exons: 25, Transcript length: 3,308 bps, Translation length: 873 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS27818

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000145482.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.