Mouse (GRCm39)
Description

claudin domain containing 1 [Source:MGI Symbol;Acc:MGI:2447860]

Gene Synonyms

1110019C08Rik, Cldn25

Location
About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 815 variant alleles and maps to 227 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000023426.12Cldnd1-2012147253aaENSMUSP00000023426.6
 
Protein coding
CCDS28234A0A811BIT5 Q9CQX5 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000162057.8Cldnd1-2041540253aaENSMUSP00000125497.2
 
Protein coding
CCDS28234A0A811BIT5 Q9CQX5 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000162191.2Cldnd1-205491123aaENSMUSP00000124461.2
 
Protein coding
E0CY63 TSL:5CDS 3' incomplete
ENSMUST00000159944.8Cldnd1-20380599aaENSMUSP00000124455.2
 
Nonsense mediated decay
E0CY66 TSL:5
ENSMUST00000159829.2Cldnd1-202581No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000162249.2Cldnd1-206597No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,147 bps, Translation length: 253 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9CQX5

CCDS

This transcript is a member of the Mouse CCDS set: CCDS28234

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000023426.12

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.