Mouse (GRCm39)
Description

metadherin [Source:MGI Symbol;Acc:MGI:1914404]

Gene Synonyms

2610103J23Rik, 3D3/Lyric, AEG-1, D8Bwg1112e, Lyric

Location
About this transcript

This transcript has 5 exons, is associated with 687 variant alleles and maps to 110 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000022865.17Mtdh-2016919579aaENSMUSP00000022865.10
 
Protein coding
CCDS27415Q80WJ7 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000163333.9Mtdh-2021593393aaENSMUSP00000130190.3
 
Protein coding
F6QHD1 TSL:5CDS 5' incomplete
ENSMUST00000170050.8Mtdh-2061147382aaENSMUSP00000128288.2
 
Protein coding
F6QFT1 TSL:5CDS 5' and 3' incomplete
ENSMUST00000169905.2Mtdh-2051070356aaENSMUSP00000131814.2
 
Protein coding
F6ZSG0 TSL:5CDS 5' and 3' incomplete
ENSMUST00000170553.8Mtdh-207659220aaENSMUSP00000126167.2
 
Protein coding
F6ZQL0 TSL:5CDS 5' and 3' incomplete
ENSMUST00000168991.8Mtdh-204989164aaENSMUSP00000129500.2
 
Nonsense mediated decay
E9PUX0 TSL:5
ENSMUST00000226992.2Mtdh-21259691aaENSMUSP00000154553.2
 
Nonsense mediated decay
A0A2I3BRF4 CDS 5' incomplete
ENSMUST00000171711.2Mtdh-2081200No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000172083.2Mtdh-210772No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000163697.2Mtdh-2035563No protein-
 
Retained intron
-TSL:5
ENSMUST00000172082.2Mtdh-2094582No protein-
 
Retained intron
-TSL:1
ENSMUST00000226331.2Mtdh-211426No protein-
 
Retained intron
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Statistics

Exons: 5, Coding exons: 3, Transcript length: 596 bps, Translation length: 91 residues

Incomplete CDS

CDS 5' incomplete

Version

ENSMUST00000226992.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.