Mouse (GRCm39)
Description

short chain dehydrogenase/reductase family 39U, member 1 [Source:MGI Symbol;Acc:MGI:1916876]

Gene Synonyms

2310014G06Rik

Location
About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 626 variant alleles and maps to 172 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000111325.5Sdr39u1-2011255293aaENSMUSP00000106957.4
 
Protein coding
CCDS36935Q5M8N4 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000227211.2Sdr39u1-209543137aaENSMUSP00000153845.2
 
Protein coding
A0A2I3BPM4 CDS 5' incomplete
ENSMUST00000227387.2Sdr39u1-211416139aaENSMUSP00000154325.2
 
Protein coding
A0A2I3BQS7 CDS 5' and 3' incomplete
ENSMUST00000227032.2Sdr39u1-2061023147aaENSMUSP00000154624.2
 
Nonsense mediated decay
A0A2I3BRL7 -
ENSMUST00000226273.2Sdr39u1-20235164aaENSMUSP00000154028.2
 
Nonsense mediated decay
A0A2I3BQD5 -
ENSMUST00000226427.2Sdr39u1-204813No protein-
 
Protein coding CDS not defined
--
ENSMUST00000227163.2Sdr39u1-208792No protein-
 
Protein coding CDS not defined
--
ENSMUST00000227499.2Sdr39u1-212498No protein-
 
Protein coding CDS not defined
--
ENSMUST00000227268.2Sdr39u1-210909No protein-
 
Retained intron
--
ENSMUST00000227139.2Sdr39u1-207867No protein-
 
Retained intron
--
ENSMUST00000228209.2Sdr39u1-217846No protein-
 
Retained intron
--
ENSMUST00000226338.2Sdr39u1-203831No protein-
 
Retained intron
--
ENSMUST00000227965.2Sdr39u1-215709No protein-
 
Retained intron
--
ENSMUST00000227712.2Sdr39u1-214650No protein-
 
Retained intron
--
ENSMUST00000227677.2Sdr39u1-213546No protein-
 
Retained intron
--
ENSMUST00000226746.2Sdr39u1-205501No protein-
 
Retained intron
--
ENSMUST00000228151.2Sdr39u1-216385No protein-
 
Retained intron
--
Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,255 bps, Translation length: 293 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5M8N4

CCDS

This transcript is a member of the Mouse CCDS set: CCDS36935

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000111325.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.