Mouse (GRCm39)
Description

TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]

Gene Synonyms

Egr5, TSC-22, Tgfb1i4

Location
About this transcript

This transcript has 3 exons, is annotated with 10 domains and features, is associated with 693 variant alleles and maps to 280 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000048371.15Tsc22d1-20248181077aaENSMUSP00000044517.9
 
Protein coding
CCDS27285E9QLZ1 Ensembl CanonicalGENCODE basicTSL:1
ENSMUST00000110888.8Tsc22d1-2044999995aaENSMUSP00000106513.2
 
Protein coding
CCDS79344D3Z0V7 GENCODE basicTSL:1
ENSMUST00000022587.10Tsc22d1-2011762143aaENSMUSP00000022587.10
 
Protein coding
CCDS27286P62500-2 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000177207.2Tsc22d1-214147686aaENSMUSP00000135296.2
 
Protein coding
CCDS79345H3BLI9 GENCODE basicTSL:3
ENSMUST00000101618.9Tsc22d1-2031043107aaENSMUSP00000099140.3
 
Protein coding
CCDS49545D3YW86 GENCODE basicTSL:1
ENSMUST00000134109.2Tsc22d1-20680182aaENSMUSP00000135146.2
 
Protein coding
H3BJV9 GENCODE basicTSL:2
ENSMUST00000142683.8Tsc22d1-20879786aaENSMUSP00000135493.2
 
Protein coding
CCDS79345H3BLI9 GENCODE basicTSL:3
ENSMUST00000133224.2Tsc22d1-20578686aaENSMUSP00000135561.2
 
Protein coding
CCDS79345H3BLI9 GENCODE basicTSL:2
ENSMUST00000140251.9Tsc22d1-20767086aaENSMUSP00000135806.2
 
Protein coding
CCDS79345H3BLI9 GENCODE basicTSL:2
ENSMUST00000176581.2Tsc22d1-212398132aaENSMUSP00000135789.2
 
Protein coding
H3BLH4 TSL:5CDS 5' and 3' incomplete
ENSMUST00000176886.2Tsc22d1-2132278128aaENSMUSP00000135202.2
 
Nonsense mediated decay
H3BK07 TSL:5CDS 5' incomplete
ENSMUST00000175984.2Tsc22d1-211917133aaENSMUSP00000135307.2
 
Nonsense mediated decay
H3BK98 TSL:3CDS 5' incomplete
ENSMUST00000177471.2Tsc22d1-21680195aaENSMUSP00000134792.2
 
Nonsense mediated decay
H3BJ00 TSL:5CDS 5' incomplete
ENSMUST00000175811.8Tsc22d1-210650No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000177333.2Tsc22d1-215438No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000175655.2Tsc22d1-209603No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,762 bps, Translation length: 143 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P62500

CCDS

This transcript is a member of the Mouse CCDS set: CCDS27286

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000022587.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.