Mouse (GRCm39)
Description

nischarin [Source:MGI Symbol;Acc:MGI:1928323]

Gene Synonyms

1200007D05Rik, 3202002H23Rik, edsn

Location
About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 1072 variant alleles and maps to 105 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000022469.13Nisch-20155591593aaENSMUSP00000022469.7
 
Protein coding
CCDS36853Q80TM9 Ensembl CanonicalGENCODE basicTSL:2
ENSMUST00000168206.8Nisch-21349901348aaENSMUSP00000132842.2
 
Protein coding
Q80TM9-3 GENCODE basicTSL:1
ENSMUST00000172142.8Nisch-2222780516aaENSMUSP00000132413.2
 
Protein coding
CCDS84107Q80TM9-6 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000165981.8Nisch-2082415472aaENSMUSP00000130210.2
 
Protein coding
Q80TM9-4 GENCODE basicTSL:1
ENSMUST00000171735.2Nisch-2211763153aaENSMUSP00000127132.2
 
Protein coding
Q80TM9-7 GENCODE basicTSL:1
ENSMUST00000169628.8Nisch-2161204333aaENSMUSP00000131465.2
 
Protein coding
F6YR29 TSL:3CDS 5' incomplete
ENSMUST00000167449.2Nisch-210856166aaENSMUSP00000126001.2
 
Protein coding
F7AFP3 TSL:2CDS 5' incomplete
ENSMUST00000170253.8Nisch-218589149aaENSMUSP00000129547.2
 
Protein coding
F6ZL69 TSL:2CDS 5' incomplete
ENSMUST00000164989.8Nisch-2072276334aaENSMUSP00000126982.2
 
Nonsense mediated decay
Q80TM9-5 TSL:1
ENSMUST00000170436.8Nisch-22076145aaENSMUSP00000131861.2
 
Nonsense mediated decay
F6ZL22 TSL:3CDS 5' incomplete
ENSMUST00000169149.8Nisch-21568358aaENSMUSP00000131623.2
 
Nonsense mediated decay
F7AVB2 TSL:3CDS 5' incomplete
ENSMUST00000169906.2Nisch-2171206No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000170343.8Nisch-219747No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000164956.8Nisch-206736No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000163552.2Nisch-202725No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000168451.8Nisch-214689No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000167602.2Nisch-211493No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000164000.2Nisch-204389No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000164617.2Nisch-2053716No protein-
 
Retained intron
-TSL:1
ENSMUST00000167979.2Nisch-212918No protein-
 
Retained intron
-TSL:2
ENSMUST00000172370.2Nisch-223645No protein-
 
Retained intron
-TSL:2
ENSMUST00000163846.2Nisch-203632No protein-
 
Retained intron
-TSL:2
ENSMUST00000167223.2Nisch-209431No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 4, Coding exons: 4, Transcript length: 589 bps, Translation length: 149 residues

Transcript Support Level (TSL)

TSL:2

Incomplete CDS

CDS 5' incomplete

Version

ENSMUST00000170253.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.