Mouse (GRCm39)
Description

geranylgeranyl diphosphate synthase 1 [Source:MGI Symbol;Acc:MGI:1341724]

Gene Synonyms

1810026C22Rik, 9530089B04Rik, GGPP synthase

Location
About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 822 variant alleles and maps to 115 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000170957.3Ggps1-2014244300aaENSMUSP00000126603.2
 
Protein coding
CCDS26248Q3V0T8 Q9WTN0 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000223174.2Ggps1-210870181aaENSMUSP00000152645.2
 
Protein coding
A0A1Y7VJZ1 TSL:2CDS 3' incomplete
ENSMUST00000223329.2Ggps1-211829101aaENSMUSP00000152754.2
 
Protein coding
A0A1Y7VMJ4 TSL:3CDS 5' incomplete
ENSMUST00000221953.2Ggps1-205804116aaENSMUSP00000152753.2
 
Protein coding
A0A1Y7VM16 TSL:3CDS 3' incomplete
ENSMUST00000222687.2Ggps1-207762155aaENSMUSP00000152355.2
 
Protein coding
A0A1Y7VNC9 TSL:2CDS 3' incomplete
ENSMUST00000221713.2Ggps1-20466726aaENSMUSP00000152305.2
 
Protein coding
A0A1Y7VLQ5 GENCODE basicTSL:3
ENSMUST00000221338.2Ggps1-202652126aaENSMUSP00000152649.2
 
Protein coding
A0A1Y7VNV0 TSL:3CDS 3' incomplete
ENSMUST00000222747.2Ggps1-2082209236aaENSMUSP00000152789.2
 
Nonsense mediated decay
Q9CZZ6 TSL:5
ENSMUST00000222164.2Ggps1-2061340236aaENSMUSP00000152428.2
 
Nonsense mediated decay
Q9CZZ6 TSL:1
ENSMUST00000223090.2Ggps1-209770106aaENSMUSP00000152512.2
 
Nonsense mediated decay
A0A1Y7VLK7 TSL:2CDS 5' incomplete
ENSMUST00000221406.2Ggps1-203459No protein-
 
Protein coding CDS not defined
-TSL:3
Statistics

Exons: 4, Coding exons: 2, Transcript length: 667 bps, Translation length: 26 residues

Transcript Support Level (TSL)

TSL:3

Version

ENSMUST00000221713.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.