Mouse (GRCm39)
Description

geranylgeranyl diphosphate synthase 1 [Source:MGI Symbol;Acc:MGI:1341724]

Gene Synonyms

1810026C22Rik, 9530089B04Rik, GGPP synthase

Location
About this transcript

This transcript has 4 exons, is annotated with 10 domains and features, is associated with 1013 variant alleles and maps to 455 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000170957.3Ggps1-2014244300aaENSMUSP00000126603.2
 
Protein coding
CCDS26248Q3V0T8 Q9WTN0 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000223174.2Ggps1-210870181aaENSMUSP00000152645.2
 
Protein coding
A0A1Y7VJZ1 TSL:2CDS 3' incomplete
ENSMUST00000223329.2Ggps1-211829101aaENSMUSP00000152754.2
 
Protein coding
A0A1Y7VMJ4 TSL:3CDS 5' incomplete
ENSMUST00000221953.2Ggps1-205804116aaENSMUSP00000152753.2
 
Protein coding
A0A1Y7VM16 TSL:3CDS 3' incomplete
ENSMUST00000222687.2Ggps1-207762155aaENSMUSP00000152355.2
 
Protein coding
A0A1Y7VNC9 TSL:2CDS 3' incomplete
ENSMUST00000221713.2Ggps1-20466726aaENSMUSP00000152305.2
 
Protein coding
A0A1Y7VLQ5 GENCODE basicTSL:3
ENSMUST00000221338.2Ggps1-202652126aaENSMUSP00000152649.2
 
Protein coding
A0A1Y7VNV0 TSL:3CDS 3' incomplete
ENSMUST00000222747.2Ggps1-2082209236aaENSMUSP00000152789.2
 
Nonsense mediated decay
Q9CZZ6 TSL:5
ENSMUST00000222164.2Ggps1-2061340236aaENSMUSP00000152428.2
 
Nonsense mediated decay
Q9CZZ6 TSL:1
ENSMUST00000223090.2Ggps1-209770106aaENSMUSP00000152512.2
 
Nonsense mediated decay
A0A1Y7VLK7 TSL:2CDS 5' incomplete
ENSMUST00000221406.2Ggps1-203459No protein-
 
Protein coding CDS not defined
-TSL:3
Statistics

Exons: 4, Coding exons: 3, Transcript length: 4,244 bps, Translation length: 300 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9WTN0

CCDS

This transcript is a member of the Mouse CCDS set: CCDS26248

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000170957.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.