Mouse (GRCm39)
Description

structural maintenance of chromosomes 6 [Source:MGI Symbol;Acc:MGI:1914491]

Gene Synonyms

2810489L22Rik, 3830418C19Rik, Smc6l1

Location
About this transcript

This transcript has 27 exons, is annotated with 19 domains and features, is associated with 3042 variant alleles and maps to 469 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000020931.6Smc6-20156031097aaENSMUSP00000020931.6
 
Protein coding
CCDS25815Q924W5 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000218866.2Smc6-2083373326aaENSMUSP00000151976.2
 
Protein coding
Q924W5-2 GENCODE basicTSL:1
ENSMUST00000217991.2Smc6-204536179aaENSMUSP00000151378.2
 
Protein coding
A0A1W2P6V7 TSL:3CDS 5' and 3' incomplete
ENSMUST00000218815.2Smc6-207470103aaENSMUSP00000151435.2
 
Protein coding
A0A1W2P6W0 TSL:3CDS 5' incomplete
ENSMUST00000217930.2Smc6-203463100aaENSMUSP00000151232.2
 
Protein coding
A0A1W2P6F2 TSL:5CDS 5' incomplete
ENSMUST00000218022.2Smc6-205527291aaENSMUSP00000151643.2
 
Nonsense mediated decay
A0A1W2P7G6 TSL:1
ENSMUST00000217906.2Smc6-20246259aaENSMUSP00000151382.2
 
Nonsense mediated decay
A0A1W2P6T0 TSL:3
ENSMUST00000219776.2Smc6-21146056aaENSMUSP00000152041.2
 
Nonsense mediated decay
A0A1W2P8E7 TSL:3
ENSMUST00000218319.2Smc6-2063470No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000219041.2Smc6-210446No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000218958.2Smc6-209415No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000220289.2Smc6-2123918No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 27, Coding exons: 26, Transcript length: 5,603 bps, Translation length: 1,097 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q924W5

CCDS

This transcript is a member of the Mouse CCDS set: CCDS25815

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000020931.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.