Mouse (GRCm39)
Description

serine hydroxymethyltransferase 1 (soluble) [Source:MGI Symbol;Acc:MGI:98299]

Gene Synonyms

Shmt, mshmt, mshmt1, mshmt2

Location
About this transcript

This transcript has 10 exons, is annotated with 12 domains and features, is associated with 1408 variant alleles and maps to 308 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000018744.15Shmt1-2012858478aaENSMUSP00000018744.9
 
Protein coding
CCDS24799P50431 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000174214.2Shmt1-2101324441aaENSMUSP00000134269.2
 
Protein coding
G3UYY1 TSL:5CDS 5' incomplete
ENSMUST00000174719.8Shmt1-2111318439aaENSMUSP00000134318.2
 
Protein coding
G3UZ26 TSL:5CDS 5' incomplete
ENSMUST00000174174.8Shmt1-2091319122aaENSMUSP00000134703.2
 
Nonsense mediated decay
G3UZZ9 TSL:5CDS 5' incomplete
ENSMUST00000174093.8Shmt1-2081295No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000172659.2Shmt1-204565No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000173698.2Shmt1-207415No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000173260.8Shmt1-2061283No protein-
 
Retained intron
-TSL:1
ENSMUST00000172804.8Shmt1-205582No protein-
 
Retained intron
-TSL:2
ENSMUST00000124227.2Shmt1-202569No protein-
 
Retained intron
-TSL:3
ENSMUST00000135081.2Shmt1-203453No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,324 bps, Translation length: 441 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 5' incomplete

Version

ENSMUST00000174214.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]