Mouse (GRCm39)
Description

HPS5, biogenesis of lysosomal organelles complex 2 subunit 2 [Source:MGI Symbol;Acc:MGI:2180307]

Gene Synonyms

Hermansky-Pudlak syndrome 5, ru-2, ru2, ruby eye 2

Location
About this transcript

This transcript has 23 exons, is annotated with 17 domains and features, is associated with 2677 variant alleles and maps to 286 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000014562.14Hps5-20149531126aaENSMUSP00000014562.8
 
Protein coding
CCDS21286P59438 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000107653.8Hps5-20247021093aaENSMUSP00000103280.2
 
Protein coding
CCDS52254E9Q3X4 GENCODE basicTSL:1
ENSMUST00000107654.8Hps5-20344221126aaENSMUSP00000103281.2
 
Protein coding
CCDS21286P59438 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000153789.8Hps5-2111602534aaENSMUSP00000119876.2
 
Protein coding
F6Q7C7 TSL:5CDS 5' and 3' incomplete
ENSMUST00000152759.8Hps5-210813202aaENSMUSP00000115786.2
 
Protein coding
D3YYJ4 TSL:3CDS 3' incomplete
ENSMUST00000130365.2Hps5-205760253aaENSMUSP00000114384.2
 
Protein coding
F6YT95 TSL:5CDS 5' and 3' incomplete
ENSMUST00000211571.2Hps5-215660134aaENSMUSP00000147406.2
 
Protein coding
A0A1B0GR75 TSL:5CDS 5' incomplete
ENSMUST00000123725.2Hps5-204658119aaENSMUSP00000116770.2
 
Protein coding
D3Z3L4 TSL:2CDS 3' incomplete
ENSMUST00000211471.2Hps5-214357119aaENSMUSP00000147976.2
 
Protein coding
A0A1B0GSK6 TSL:5CDS 5' and 3' incomplete
ENSMUST00000142663.8Hps5-2074735526aaENSMUSP00000122887.2
 
Nonsense mediated decay
P59438-3 TSL:1
ENSMUST00000211347.2Hps5-2134726204aaENSMUSP00000147450.2
 
Nonsense mediated decay
A0A1B0GRB1 TSL:1
ENSMUST00000138480.2Hps5-20683977aaENSMUSP00000147750.2
 
Nonsense mediated decay
A0A1B0GS11 TSL:3CDS 5' incomplete
ENSMUST00000145776.8Hps5-2094918No protein-
 
Retained intron
-TSL:1
ENSMUST00000157026.2Hps5-212674No protein-
 
Retained intron
-TSL:2
ENSMUST00000143627.2Hps5-208657No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 23, Coding exons: 22, Transcript length: 4,702 bps, Translation length: 1,093 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS52254

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000107653.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.