Mouse (GRCm39)
Description

HPS5, biogenesis of lysosomal organelles complex 2 subunit 2 [Source:MGI Symbol;Acc:MGI:2180307]

Gene Synonyms

Hermansky-Pudlak syndrome 5, ru-2, ru2, ruby eye 2

Location
About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 1107 variant alleles and maps to 50 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000014562.14Hps5-20149531126aaENSMUSP00000014562.8
 
Protein coding
CCDS21286P59438 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000107653.8Hps5-20247021093aaENSMUSP00000103280.2
 
Protein coding
CCDS52254E9Q3X4 GENCODE basicTSL:1
ENSMUST00000107654.8Hps5-20344221126aaENSMUSP00000103281.2
 
Protein coding
CCDS21286P59438 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000153789.8Hps5-2111602534aaENSMUSP00000119876.2
 
Protein coding
F6Q7C7 TSL:5CDS 5' and 3' incomplete
ENSMUST00000152759.8Hps5-210813202aaENSMUSP00000115786.2
 
Protein coding
D3YYJ4 TSL:3CDS 3' incomplete
ENSMUST00000130365.2Hps5-205760253aaENSMUSP00000114384.2
 
Protein coding
F6YT95 TSL:5CDS 5' and 3' incomplete
ENSMUST00000211571.2Hps5-215660134aaENSMUSP00000147406.2
 
Protein coding
A0A1B0GR75 TSL:5CDS 5' incomplete
ENSMUST00000123725.2Hps5-204658119aaENSMUSP00000116770.2
 
Protein coding
D3Z3L4 TSL:2CDS 3' incomplete
ENSMUST00000211471.2Hps5-214357119aaENSMUSP00000147976.2
 
Protein coding
A0A1B0GSK6 TSL:5CDS 5' and 3' incomplete
ENSMUST00000142663.8Hps5-2074735526aaENSMUSP00000122887.2
 
Nonsense mediated decay
P59438-3 TSL:1
ENSMUST00000211347.2Hps5-2134726204aaENSMUSP00000147450.2
 
Nonsense mediated decay
A0A1B0GRB1 TSL:1
ENSMUST00000138480.2Hps5-20683977aaENSMUSP00000147750.2
 
Nonsense mediated decay
A0A1B0GS11 TSL:3CDS 5' incomplete
ENSMUST00000145776.8Hps5-2094918No protein-
 
Retained intron
-TSL:1
ENSMUST00000157026.2Hps5-212674No protein-
 
Retained intron
-TSL:2
ENSMUST00000143627.2Hps5-208657No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 6, Coding exons: 5, Transcript length: 813 bps, Translation length: 202 residues

Transcript Support Level (TSL)

TSL:3

Incomplete CDS

CDS 3' incomplete

Version

ENSMUST00000152759.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.