Mouse (GRCm39)
Description

syntaxin 5A [Source:MGI Symbol;Acc:MGI:1928483]

Gene Synonyms

0610031F24Rik, D19Ertd627e, syntaxin 5

Location
About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 540 variant alleles and maps to 61 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000010254.16Stx5a-2011780442aaENSMUSP00000010254.10
 
Protein coding
I1E4X1 Ensembl CanonicalGENCODE basicTSL:5
ENSMUST00000176381.8Stx5a-2132251355aaENSMUSP00000134854.2
 
Protein coding
CCDS29542Q8K1E0 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000073430.14Stx5a-2022112355aaENSMUSP00000073136.8
 
Protein coding
CCDS29542Q8K1E0 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000175901.8Stx5a-2061153262aaENSMUSP00000134951.2
 
Protein coding
H3BJE3 TSL:5CDS 3' incomplete
ENSMUST00000176968.2Stx5a-2171049109aaENSMUSP00000135468.2
 
Protein coding
H3BKP3 TSL:2CDS 3' incomplete
ENSMUST00000177373.8Stx5a-219995259aaENSMUSP00000134794.2
 
Protein coding
H3BJ02 GENCODE basicTSL:5
ENSMUST00000176570.2Stx5a-21556357aaENSMUSP00000134892.2
 
Protein coding
H3BJ89 GENCODE basicTSL:2
ENSMUST00000176314.8Stx5a-21237877aaENSMUSP00000135348.2
 
Protein coding
H3BKD6 TSL:3CDS 3' incomplete
ENSMUST00000176013.8Stx5a-2082106144aaENSMUSP00000135465.2
 
Nonsense mediated decay
H3BKP0 TSL:5
ENSMUST00000175872.8Stx5a-2051720234aaENSMUSP00000135416.2
 
Nonsense mediated decay
H3BKJ7 TSL:5
ENSMUST00000177322.8Stx5a-2181697101aaENSMUSP00000135624.2
 
Nonsense mediated decay
H3BL25 TSL:5
ENSMUST00000176093.2Stx5a-2093015No protein-
 
Retained intron
-TSL:NA
ENSMUST00000176260.8Stx5a-2111025No protein-
 
Retained intron
-TSL:5
ENSMUST00000175834.2Stx5a-204789No protein-
 
Retained intron
-TSL:NA
ENSMUST00000176009.2Stx5a-207774No protein-
 
Retained intron
-TSL:3
ENSMUST00000176182.8Stx5a-210670No protein-
 
Retained intron
-TSL:2
ENSMUST00000176404.2Stx5a-214584No protein-
 
Retained intron
-TSL:3
ENSMUST00000175642.2Stx5a-203523No protein-
 
Retained intron
-TSL:2
ENSMUST00000176844.2Stx5a-216419No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 3, Coding exons: 2, Transcript length: 378 bps, Translation length: 77 residues

Transcript Support Level (TSL)

TSL:3

Incomplete CDS

CDS 3' incomplete

Version

ENSMUST00000176314.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.