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EnsemblEnsembl Home
Description

cold inducible RNA binding protein [Source:HGNC Symbol;Acc:HGNC:1982]

Gene Synonyms

CIRP

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000587896.6CIRBP-2143346297aaENSP00000466025.1
 
Protein coding
CCDS74245D6W5Y5 NM_001300829.2MANE Select v0.95Ensembl CanonicalGENCODE basicTSL:2
ENST00000589710.5CIRBP-2251835297aaENSP00000466897.1
 
Protein coding
CCDS74245D6W5Y5 -GENCODE basicTSL:2
ENST00000588030.5CIRBP-2151509172aaENSP00000468788.1
 
Protein coding
CCDS12059Q14011-1 -GENCODE basicAPPRIS P3TSL:5
ENST00000588090.5CIRBP-2161459172aaENSP00000466207.1
 
Protein coding
CCDS12059Q14011-1 -GENCODE basicAPPRIS P3TSL:3
ENST00000320936.9CIRBP-2011328172aaENSP00000322887.4
 
Protein coding
CCDS12059Q14011-1 -GENCODE basicAPPRIS P3TSL:1
ENST00000586472.5CIRBP-2071303172aaENSP00000465779.1
 
Protein coding
CCDS12059Q14011-1 -GENCODE basicAPPRIS P3TSL:3
ENST00000587323.5CIRBP-2131092297aaENSP00000465077.1
 
Protein coding
CCDS74245D6W5Y5 -GENCODE basicTSL:5
ENST00000589235.5CIRBP-2221073168aaENSP00000467848.1
 
Protein coding
CCDS74244K7EPM4 -GENCODE basicAPPRIS ALT1TSL:2
ENST00000628979.2CIRBP-2461043297aaENSP00000486590.1
 
Protein coding
CCDS74245D6W5Y5 -GENCODE basicTSL:2
ENST00000588230.5CIRBP-2171013297aaENSP00000465558.1
 
Protein coding
CCDS74245D6W5Y5 -GENCODE basicTSL:5
ENST00000586773.5CIRBP-211942168aaENSP00000468645.1
 
Protein coding
CCDS74244K7EPM4 -GENCODE basicAPPRIS ALT1TSL:2
ENST00000585630.5CIRBP-204870172aaENSP00000466110.1
 
Protein coding
CCDS12059Q14011-1 -GENCODE basicAPPRIS P3TSL:3
ENST00000591935.5CIRBP-235746168aaENSP00000467734.1
 
Protein coding
CCDS74244K7EPM4 -GENCODE basicAPPRIS ALT1TSL:3
ENST00000586548.5CIRBP-2081734159aaENSP00000466712.1
 
Protein coding
-K7EMY9 -TSL:3
ENST00000413636.6CIRBP-2021606263aaENSP00000412831.2
 
Protein coding
-Q14011-2 -GENCODE basicTSL:2
ENST00000588411.5CIRBP-219619105aaENSP00000465338.1
 
Protein coding
-K7EJV5 -TSL:5CDS 3' incomplete
ENST00000589266.5CIRBP-22361680aaENSP00000467138.2
 
Protein coding
-K7ENX8 -TSL:3CDS 3' incomplete
ENST00000591659.5CIRBP-234587173aaENSP00000468097.1
 
Protein coding
-K7ER40 -TSL:2CDS 3' incomplete
ENST00000592051.1CIRBP-23657332aaENSP00000468016.1
 
Protein coding
-K7EQX4 -TSL:4CDS 3' incomplete
ENST00000589686.5CIRBP-224532148aaENSP00000465334.2
 
Protein coding
-K7EJV1 -TSL:2CDS 3' incomplete
ENST00000588344.2CIRBP-21837089aaENSP00000466238.2
 
Protein coding
-K7ELV6 -TSL:3CDS 5' incomplete
ENST00000592815.5CIRBP-24033438aaENSP00000467028.2
 
Protein coding
-K7ENN6 -TSL:4CDS 3' incomplete
ENST00000586636.5CIRBP-210938168aaENSP00000464906.1
 
Nonsense mediated decay
CCDS74244K7EPM4 -TSL:2
ENST00000585913.5CIRBP-205833168aaENSP00000467449.1
 
Nonsense mediated decay
CCDS74244K7EPM4 -TSL:3
ENST00000590347.5CIRBP-2283117135aaENSP00000467307.1
 
Nonsense mediated decay
-K7ELT6 -TSL:2
ENST00000587169.5CIRBP-212302879aaENSP00000465114.1
 
Nonsense mediated decay
-K7EQL0 -TSL:2
ENST00000591097.5CIRBP-231150760aaENSP00000468229.1
 
Nonsense mediated decay
-K7EIF7 -TSL:1
ENST00000585914.5CIRBP-2061052202aaENSP00000467948.1
 
Nonsense mediated decay
-K7EQR7 -TSL:5
ENST00000591055.5CIRBP-230928135aaENSP00000466216.1
 
Nonsense mediated decay
-K7ELT6 -TSL:2
ENST00000590171.1CIRBP-22690560aaENSP00000464728.1
 
Nonsense mediated decay
-K7EIF7 -TSL:3
ENST00000591376.5CIRBP-23283079aaENSP00000464830.1
 
Nonsense mediated decay
-K7EQL0 -TSL:3
ENST00000593048.5CIRBP-24165079aaENSP00000467791.1
 
Nonsense mediated decay
-K7EQL0 -TSL:3
ENST00000444172.6CIRBP-20358458aaENSP00000407512.3
 
Nonsense mediated decay
-F6WMK9 -TSL:3CDS 5' incomplete
ENST00000592234.5CIRBP-23757173aaENSP00000466131.2
 
Nonsense mediated decay
-K7ELL4 -TSL:5CDS 5' incomplete
ENST00000592412.5CIRBP-23853279aaENSP00000467876.1
 
Nonsense mediated decay
-K7EQL0 -TSL:4
ENST00000590188.5CIRBP-227361No protein-
 
Processed transcript
---TSL:3
ENST00000593093.5CIRBP-2423528No protein-
 
Retained intron
---TSL:2
ENST00000590704.5CIRBP-2291456No protein-
 
Retained intron
---TSL:2
ENST00000588917.2CIRBP-2201087No protein-
 
Retained intron
---TSL:2
ENST00000621399.1CIRBP-2451044No protein-
 
Retained intron
---TSL:1
ENST00000592467.1CIRBP-239796No protein-
 
Retained intron
---TSL:2
ENST00000593128.5CIRBP-243796No protein-
 
Retained intron
---TSL:3
ENST00000589161.1CIRBP-221769No protein-
 
Retained intron
---TSL:3
ENST00000593283.5CIRBP-244758No protein-
 
Retained intron
---TSL:5
ENST00000586555.2CIRBP-209716No protein-
 
Retained intron
---TSL:2
ENST00000591622.1CIRBP-233548No protein-
 
Retained intron
---TSL:4
Description

calpastatin [Source:HGNC Symbol;Acc:HGNC:1515]

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000675179.1CAST-2504490791aaENSP00000501872.1
 
Protein coding
-P20810-6 NM_001750.7MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS ALT2
ENST00000395812.6CAST-2064506750aaENSP00000379157.2
 
Protein coding
CCDS54882P20810-9 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000674984.1CAST-2474330769aaENSP00000501713.1
 
Protein coding
CCDS43344P20810-10 -GENCODE basicAPPRIS ALT2
ENST00000309190.9CAST-2014282686aaENSP00000312523.5
 
Protein coding
CCDS4082P20810-8 -GENCODE basicAPPRIS P3TSL:1
ENST00000338252.7CAST-2032972695aaENSP00000343421.3
 
Protein coding
CCDS54883P20810-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000504465.5CAST-2132336636aaENSP00000425670.1
 
Protein coding
CCDS75279E9PDE4 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000509903.5CAST-2282171673aaENSP00000426946.1
 
Protein coding
CCDS83017E9PCH5 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000395813.5CAST-2074356708aaENSP00000379158.2
 
Protein coding
-P20810-1 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000675033.1CAST-2484296667aaENSP00000501659.1
 
Protein coding
-P20810-4 -GENCODE basicAPPRIS ALT2
ENST00000675663.1CAST-2574263754aaENSP00000502449.1
 
Protein coding
-A0A6Q8PH20 -GENCODE basicAPPRIS ALT2
ENST00000674702.1CAST-2464067704aaENSP00000502345.1
 
Protein coding
-A0A6Q8PGN6 -GENCODE basicAPPRIS ALT2
ENST00000674587.1CAST-2454024609aaENSP00000501797.1
 
Protein coding
-A0A6Q8PFF6 -GENCODE basic
ENST00000675479.1CAST-2553991662aaENSP00000502244.1
 
Protein coding
-A0A6Q8PGG5 -GENCODE basicAPPRIS ALT2
ENST00000437034.6CAST-2093377436aaENSP00000412374.2
 
Protein coding
-H0Y7F0 -TSL:1CDS 5' incomplete
ENST00000325674.11CAST-2023356430aaENSP00000320319.8
 
Protein coding
-H0YD33 -GENCODE basicTSL:5
ENST00000511049.5CAST-2343273693aaENSP00000421130.1
 
Protein coding
-E7EVY3 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000675185.1CAST-2512772252aaENSP00000501838.1
 
Protein coding
-A0A6Q8PFL0 -CDS 5' incomplete
ENST00000675614.1CAST-2562727681aaENSP00000502136.1
 
Protein coding
-A0A6Q8PG72 -GENCODE basicAPPRIS ALT2
ENST00000508608.6CAST-2232699741aaENSP00000422677.2
 
Protein coding
-A0A0C4DGB5 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000508830.5CAST-2242539791aaENSP00000425721.1
 
Protein coding
-P20810-6 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000675858.1CAST-2592529615aaENSP00000501780.1
 
Protein coding
-A0A6Q8PFE5 -GENCODE basic
ENST00000341926.7CAST-2042487708aaENSP00000339914.3
 
Protein coding
-P20810-1 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000511782.5CAST-2362466694aaENSP00000423638.1
 
Protein coding
-B7Z574 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000510756.6CAST-2332428667aaENSP00000422176.2
 
Protein coding
-P20810-4 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000510156.5CAST-2302079642aaENSP00000422325.1
 
Protein coding
-E7ES10 -TSL:5CDS 3' incomplete
ENST00000510500.5CAST-2321835465aaENSP00000424160.1
 
Protein coding
-H0Y9H6 -TSL:1CDS 5' incomplete
ENST00000508579.5CAST-2221758423aaENSP00000425787.1
 
Protein coding
-E7EQ12 -GENCODE basicTSL:2
ENST00000515663.5CAST-2441473431aaENSP00000422929.1
 
Protein coding
-E7EQA0 -GENCODE basicTSL:2
ENST00000511097.6CAST-2351399393aaENSP00000422951.2
 
Protein coding
-F8W7E0 -TSL:5CDS 3' incomplete
ENST00000421689.6CAST-208913304aaENSP00000396558.2
 
Protein coding
-E9PSG1 -TSL:5CDS 3' incomplete
ENST00000512620.5CAST-238904301aaENSP00000426422.1
 
Protein coding
-H0YA91 -TSL:5CDS 5' and 3' incomplete
ENST00000505143.5CAST-215864288aaENSP00000422957.1
 
Protein coding
-H0Y944 -TSL:3CDS 5' and 3' incomplete
ENST00000514845.5CAST-241588150aaENSP00000422612.1
 
Protein coding
-D6RBR1 -TSL:4CDS 3' incomplete
ENST00000506811.5CAST-217582156aaENSP00000427092.1
 
Protein coding
-E7EN75 -TSL:5CDS 3' incomplete
ENST00000508197.1CAST-221567156aaENSP00000422831.1
 
Protein coding
-E7EQK6 -TSL:3CDS 3' incomplete
ENST00000509259.5CAST-22556591aaENSP00000423846.1
 
Protein coding
-D6RC54 -TSL:4CDS 3' incomplete
ENST00000514055.5CAST-240559149aaENSP00000421230.1
 
Protein coding
-D6RGF7 -TSL:5CDS 3' incomplete
ENST00000503828.5CAST-21149978aaENSP00000422807.1
 
Protein coding
-D6RAA8 -TSL:2CDS 3' incomplete
ENST00000675266.1CAST-252432381aaENSP00000502619.1
 
Nonsense mediated decay
-A0A6Q8PH83 -CDS 5' incomplete
ENST00000675267.1CAST-2534300110aaENSP00000502095.1
 
Nonsense mediated decay
-A0A6Q8PG40 --
ENST00000484552.6CAST-2101767430aaENSP00000432878.2
 
Nonsense mediated decay
-H0YD33 -TSL:1
ENST00000675275.1CAST-254139994aaENSP00000501916.1
 
Nonsense mediated decay
-A0A6Q8PFR3 -CDS 5' incomplete
ENST00000510098.1CAST-2291323203aaENSP00000427195.1
 
Nonsense mediated decay
-A0A0C4DGD1 -TSL:1
ENST00000508117.6CAST-22057182aaENSP00000422466.1
 
Nonsense mediated decay
-D6RBZ8 -TSL:5
ENST00000348386.7CAST-2052272No protein-
 
Processed transcript
---TSL:1
ENST00000675734.1CAST-2581111No protein-
 
Processed transcript
----
ENST00000504221.5CAST-212578No protein-
 
Processed transcript
---TSL:3
ENST00000509602.1CAST-227557No protein-
 
Processed transcript
---TSL:4
ENST00000507836.1CAST-219449No protein-
 
Processed transcript
---TSL:3
ENST00000507487.5CAST-218396No protein-
 
Processed transcript
---TSL:5
ENST00000505402.1CAST-216362No protein-
 
Processed transcript
---TSL:4
ENST00000675107.1CAST-2493117No protein-
 
Retained intron
----
ENST00000509529.1CAST-2263066No protein-
 
Retained intron
---TSL:2
ENST00000513666.5CAST-2391539No protein-
 
Retained intron
---TSL:2
ENST00000504532.1CAST-214714No protein-
 
Retained intron
---TSL:2
ENST00000515063.1CAST-242654No protein-
 
Retained intron
---TSL:1
ENST00000515160.5CAST-243617No protein-
 
Retained intron
---TSL:2
ENST00000510245.1CAST-231561No protein-
 
Retained intron
---TSL:4
ENST00000512191.1CAST-237406No protein-
 
Retained intron
---TSL:2
Description

heterogeneous nuclear ribonucleoprotein U [Source:HGNC Symbol;Acc:HGNC:5048]

Gene Synonyms

C1orf199, FLJ30202, FLJ37978, HNRNPU-AS1, HNRPU, NCRNA00201, SAF-A

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000640218.2HNRNPU-2266867825aaENSP00000491215.1
 
Protein coding
CCDS41479Q00839-1 NM_031844.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:1
ENST00000444376.7HNRNPU-2056827806aaENSP00000393151.2
 
Protein coding
CCDS31081Q00839-2 -GENCODE basicAPPRIS P3TSL:1
ENST00000639628.1HNRNPU-2194546549aaENSP00000491340.1
 
Protein coding
-A0A1W2PPH7 -GENCODE basicTSL:1
ENST00000640001.1HNRNPU-2234227546aaENSP00000491294.1
 
Protein coding
-A0A1W2PP34 -GENCODE basicTSL:5
ENST00000440865.2HNRNPU-2043207602aaENSP00000410728.2
 
Protein coding
-Q5RI18 -GENCODE basicTSL:2
ENST00000283179.14HNRNPU-2013120744aaENSP00000283179.10
 
Protein coding
-A0A1X7SBS1 -GENCODE basicTSL:5
ENST00000638475.1HNRNPU-2142698728aaENSP00000491305.1
 
Protein coding
-A0A1W2PP35 -TSL:5CDS 5' incomplete
ENST00000638716.1HNRNPU-2162640547aaENSP00000491601.1
 
Protein coding
-A0A1W2PPL4 -GENCODE basicTSL:5
ENST00000639824.1HNRNPU-2211450327aaENSP00000491903.1
 
Protein coding
-A0A1W2PQD4 -TSL:5CDS 5' incomplete
ENST00000483966.3HNRNPU-2101069302aaENSP00000492573.1
 
Protein coding
-A0A1W2PRZ7 -TSL:2CDS 5' incomplete
ENST00000475997.6HNRNPU-2085290152aaENSP00000482621.2
 
Nonsense mediated decay
-A0A087WZF3 -TSL:5CDS 5' incomplete
ENST00000639880.1HNRNPU-222423970aaENSP00000490988.1
 
Nonsense mediated decay
-A0A1W2PNG3 -TSL:5
ENST00000638301.1HNRNPU-2133650372aaENSP00000491807.1
 
Nonsense mediated decay
-A0A1W2PQ74 -TSL:5
ENST00000640306.1HNRNPU-2282917804aaENSP00000491685.1
 
Nonsense mediated decay
-A0A1W2PPS1 -TSL:5
ENST00000640056.1HNRNPU-2242045128aaENSP00000492620.1
 
Nonsense mediated decay
-A0A1W2PRI6 -TSL:5CDS 5' incomplete
ENST00000638230.1HNRNPU-2121922527aaENSP00000492010.1
 
Nonsense mediated decay
-A0A1W2PQL0 -TSL:5CDS 5' incomplete
ENST00000640440.1HNRNPU-229871181aaENSP00000491263.1
 
Nonsense mediated decay
-A0A1W2PP22 -TSL:3CDS 5' incomplete
ENST00000640119.1HNRNPU-22546148aaENSP00000491491.1
 
Nonsense mediated decay
-A0A1W2PPE9 -TSL:5CDS 5' incomplete
ENST00000489705.2HNRNPU-21145117aaENSP00000479468.2
 
Nonsense mediated decay
-A0A087WVI9 -TSL:3CDS 5' incomplete
ENST00000465881.2HNRNPU-206883No protein-
 
Processed transcript
---TSL:5
ENST00000640264.1HNRNPU-227328No protein-
 
Processed transcript
---TSL:3
ENST00000649899.1HNRNPU-23113084No protein-
 
Retained intron
----
ENST00000366527.4HNRNPU-20312852No protein-
 
Retained intron
---TSL:2
ENST00000638952.1HNRNPU-2175678No protein-
 
Retained intron
---TSL:5
ENST00000468690.2HNRNPU-2075273No protein-
 
Retained intron
---TSL:5
ENST00000476241.2HNRNPU-2094844No protein-
 
Retained intron
---TSL:5
ENST00000640657.1HNRNPU-2304323No protein-
 
Retained intron
---TSL:5
ENST00000639667.1HNRNPU-2203940No protein-
 
Retained intron
---TSL:2
ENST00000366525.8HNRNPU-2022851No protein-
 
Retained intron
---TSL:5
ENST00000639064.1HNRNPU-2182625No protein-
 
Retained intron
---TSL:5
ENST00000638589.1HNRNPU-2152225No protein-
 
Retained intron
---TSL:2
Description

FXYD domain-containing ion transport regulator 5 [Source:MGI Symbol;Acc:MGI:1201785]

Gene Synonyms

EF-8, Oit2

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000161684.8Fxyd5-2071172178aaENSMUSP00000125285.2
 
Protein coding
CCDS21121P97808 Q3TDW1 GENCODE basicAPPRIS P3TSL:1
ENSMUST00000161805.8Fxyd5-2081166178aaENSMUSP00000125398.2
 
Protein coding
CCDS21121P97808 Q3TDW1 GENCODE basicAPPRIS P3TSL:1
ENSMUST00000162116.8Fxyd5-210817178aaENSMUSP00000124203.2
 
Protein coding
CCDS21121P97808 Q3TDW1 GENCODE basicAPPRIS P3TSL:5
ENSMUST00000159924.8Fxyd5-203805178aaENSMUSP00000124219.2
 
Protein coding
CCDS21121P97808 Q3TDW1 GENCODE basicAPPRIS P3TSL:5
ENSMUST00000009831.14Fxyd5-201803179aaENSMUSP00000009831.8
 
Protein coding
CCDS71935F8WJA1 GENCODE basicAPPRIS ALT2TSL:3
ENSMUST00000162087.8Fxyd5-209762178aaENSMUSP00000125065.2
 
Protein coding
CCDS21121P97808 Q3TDW1 GENCODE basicAPPRIS P3TSL:3
ENSMUST00000162733.8Fxyd5-2122998185aaENSMUSP00000125173.2
 
Protein coding
-E0CXN1 GENCODE basicTSL:1
ENSMUST00000162250.8Fxyd5-211500127aaENSMUSP00000124129.2
 
Protein coding
-F6TWM7 TSL:5CDS 5' incomplete
ENSMUST00000160689.8Fxyd5-205375117aaENSMUSP00000125187.2
 
Protein coding
-E0CXM5 TSL:3CDS 3' incomplete
ENSMUST00000159753.2Fxyd5-202375111aaENSMUSP00000123813.2
 
Protein coding
-E0CYX7 TSL:5CDS 3' incomplete
ENSMUST00000202395.4Fxyd5-213353108aaENSMUSP00000144377.2
 
Protein coding
-A0A0J9YUX0 TSL:3CDS 3' incomplete
ENSMUST00000160006.2Fxyd5-204885No protein-
 
Retained intron
--TSL:3
ENSMUST00000205301.2Fxyd5-214593No protein-
 
Retained intron
--TSL:2
ENSMUST00000161259.2Fxyd5-206338No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 7, Coding exons: 7, Transcript length: 500 bps, Translation length: 127 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 5' incomplete

Version

ENSMUST00000162250.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays

    HASH(0x29166010)