Mouse (GRCm39)
Description

histone deacetylase 5 [Source:MGI Symbol;Acc:MGI:1333784]

Gene Synonyms

mHDA1

About this transcript

This transcript has 16 exons, is associated with 1520 variant alleles and maps to 610 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000008999.12Hdac5-20142691121aaENSMUSP00000008999.6
 
Protein coding
CCDS70320B7ZDF5 Ensembl CanonicalGENCODE basicTSL:1
ENSMUST00000107151.9Hdac5-20348521030aaENSMUSP00000102769.3
 
Protein coding
A2AWS5 GENCODE basicTSL:5
ENSMUST00000107152.9Hdac5-20437881115aaENSMUSP00000102770.3
 
Protein coding
CCDS36341Q3UJF1 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000107150.8Hdac5-20237591102aaENSMUSP00000102768.2
 
Protein coding
CCDS70321B7ZDF7 GENCODE basicTSL:1
ENSMUST00000131254.2Hdac5-209721158aaENSMUSP00000118108.2
 
Protein coding
B7ZDF6 TSL:3CDS 3' incomplete
ENSMUST00000156337.2Hdac5-220692175aaENSMUSP00000116646.2
 
Protein coding
B7ZDF4 TSL:5CDS 3' incomplete
ENSMUST00000140962.8Hdac5-214427142aaENSMUSP00000115435.2
 
Protein coding
B7ZDF3 TSL:5CDS 5' and 3' incomplete
ENSMUST00000124077.8Hdac5-205387264aaENSMUSP00000116672.2
 
Nonsense mediated decay
D6RH93 TSL:1
ENSMUST00000125072.2Hdac5-206493No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000128686.8Hdac5-208422No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000149087.8Hdac5-2165406No protein-
 
Retained intron
-TSL:1
ENSMUST00000150965.8Hdac5-2181008No protein-
 
Retained intron
-TSL:1
ENSMUST00000137787.8Hdac5-212851No protein-
 
Retained intron
-TSL:3
ENSMUST00000140481.2Hdac5-213814No protein-
 
Retained intron
-TSL:3
ENSMUST00000136304.8Hdac5-211754No protein-
 
Retained intron
-TSL:3
ENSMUST00000155065.2Hdac5-219695No protein-
 
Retained intron
-TSL:3
ENSMUST00000133651.2Hdac5-210672No protein-
 
Retained intron
-TSL:5
ENSMUST00000150683.2Hdac5-217650No protein-
 
Retained intron
-TSL:2
ENSMUST00000126453.8Hdac5-207644No protein-
 
Retained intron
-TSL:2
ENSMUST00000145540.2Hdac5-215537No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 16, Coding exons: 0, Transcript length: 5,406 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000149087.8

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.