Mouse (GRCm39)
Description

histone deacetylase 5 [Source:MGI Symbol;Acc:MGI:1333784]

Gene Synonyms

mHDA1

About this transcript

This transcript has 29 exons, is annotated with 30 domains and features, is associated with 2053 variant alleles and maps to 499 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000008999.12Hdac5-20142691121aaENSMUSP00000008999.6
 
Protein coding
CCDS70320B7ZDF5 Ensembl CanonicalGENCODE basicTSL:1
ENSMUST00000107151.9Hdac5-20348521030aaENSMUSP00000102769.3
 
Protein coding
A2AWS5 GENCODE basicTSL:5
ENSMUST00000107152.9Hdac5-20437881115aaENSMUSP00000102770.3
 
Protein coding
CCDS36341Q3UJF1 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000107150.8Hdac5-20237591102aaENSMUSP00000102768.2
 
Protein coding
CCDS70321B7ZDF7 GENCODE basicTSL:1
ENSMUST00000131254.2Hdac5-209721158aaENSMUSP00000118108.2
 
Protein coding
B7ZDF6 TSL:3CDS 3' incomplete
ENSMUST00000156337.2Hdac5-220692175aaENSMUSP00000116646.2
 
Protein coding
B7ZDF4 TSL:5CDS 3' incomplete
ENSMUST00000140962.8Hdac5-214427142aaENSMUSP00000115435.2
 
Protein coding
B7ZDF3 TSL:5CDS 5' and 3' incomplete
ENSMUST00000124077.8Hdac5-205387264aaENSMUSP00000116672.2
 
Nonsense mediated decay
D6RH93 TSL:1
ENSMUST00000125072.2Hdac5-206493No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000128686.8Hdac5-208422No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000149087.8Hdac5-2165406No protein-
 
Retained intron
-TSL:1
ENSMUST00000150965.8Hdac5-2181008No protein-
 
Retained intron
-TSL:1
ENSMUST00000137787.8Hdac5-212851No protein-
 
Retained intron
-TSL:3
ENSMUST00000140481.2Hdac5-213814No protein-
 
Retained intron
-TSL:3
ENSMUST00000136304.8Hdac5-211754No protein-
 
Retained intron
-TSL:3
ENSMUST00000155065.2Hdac5-219695No protein-
 
Retained intron
-TSL:3
ENSMUST00000133651.2Hdac5-210672No protein-
 
Retained intron
-TSL:5
ENSMUST00000150683.2Hdac5-217650No protein-
 
Retained intron
-TSL:2
ENSMUST00000126453.8Hdac5-207644No protein-
 
Retained intron
-TSL:2
ENSMUST00000145540.2Hdac5-215537No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 29, Coding exons: 24, Transcript length: 4,269 bps, Translation length: 1,121 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS70320

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000008999.12

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.