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Description

farnesyl-diphosphate farnesyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:3629]

Gene Synonyms

DGPT, ERG9, SQS, SQSD, SS

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000220584.9FDFT1-2012035417aaENSP00000220584.4
 
Protein coding
CCDS5985P37268-1 NM_004462.5MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000618539.4FDFT1-2242660417aaENSP00000480828.1
 
Protein coding
CCDS5985P37268-1 -GENCODE basicAPPRIS P2TSL:5
ENST00000615631.4FDFT1-2232462417aaENSP00000481481.1
 
Protein coding
CCDS5985P37268-1 -GENCODE basicAPPRIS P2TSL:5
ENST00000623368.3FDFT1-2262368353aaENSP00000485229.1
 
Protein coding
CCDS75696P37268-2 -GENCODE basicTSL:2
ENST00000538689.4FDFT1-2222289353aaENSP00000444248.2
 
Protein coding
CCDS75696P37268-2 -GENCODE basicTSL:2
ENST00000528812.5FDFT1-2142013353aaENSP00000431749.1
 
Protein coding
CCDS75696P37268-2 -GENCODE basicTSL:2
ENST00000622850.2FDFT1-2251987353aaENSP00000484122.1
 
Protein coding
CCDS75696P37268-2 -GENCODE basicTSL:2
ENST00000528643.5FDFT1-2121909332aaENSP00000431649.1
 
Protein coding
CCDS75697P37268-3 -GENCODE basicTSL:2
ENST00000525954.5FDFT1-2101890476aaENSP00000491537.1
 
Protein coding
CCDS87579A0A1W2PQ47 -GENCODE basicTSL:2
ENST00000530664.5FDFT1-2181761353aaENSP00000432331.1
 
Protein coding
CCDS75696P37268-2 -GENCODE basicTSL:2
ENST00000525777.5FDFT1-2081472332aaENSP00000436069.1
 
Protein coding
CCDS75697P37268-3 -GENCODE basicTSL:2
ENST00000525900.5FDFT1-2091596410aaENSP00000434714.1
 
Protein coding
-E9PNM1 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000443614.6FDFT1-2021393374aaENSP00000390367.2
 
Protein coding
-P37268-5 -GENCODE basicTSL:2
ENST00000530337.5FDFT1-217741150aaENSP00000431852.1
 
Protein coding
-E9PJG4 -TSL:3CDS 3' incomplete
ENST00000525607.5FDFT1-207177345aaENSP00000432551.1
 
Nonsense mediated decay
-E9PQ90 -TSL:2
ENST00000529464.5FDFT1-21593251aaENSP00000434770.1
 
Nonsense mediated decay
-E9PNJ2 -TSL:1
ENST00000525283.5FDFT1-20489867aaENSP00000433985.1
 
Nonsense mediated decay
-E9PSH1 -TSL:3
ENST00000532266.5FDFT1-221583113aaENSP00000435900.1
 
Nonsense mediated decay
-E9PS69 -TSL:5
ENST00000446331.6FDFT1-2031558No protein-
 
Processed transcript
---TSL:2
ENST00000525571.1FDFT1-206810No protein-
 
Processed transcript
---TSL:3
ENST00000525551.1FDFT1-205327No protein-
 
Processed transcript
---TSL:3
ENST00000531249.2FDFT1-219768No protein-
 
Retained intron
---TSL:2
ENST00000531733.1FDFT1-220712No protein-
 
Retained intron
---TSL:2
ENST00000527045.1FDFT1-211642No protein-
 
Retained intron
---TSL:1
ENST00000528729.1FDFT1-213570No protein-
 
Retained intron
---TSL:3
ENST00000529521.1FDFT1-216418No protein-
 
Retained intron
---TSL:2
Description

euchromatic histone lysine methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24650]

Gene Synonyms

EHMT1-IT1, Eu-HMTase1, FLJ12879, FLJ40292, KIAA1876, KMT1D, bA188C12.1

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000460843.6EHMT1-20350951298aaENSP00000417980.1
 
Protein coding
CCDS7050Q9H9B1-1 NM_024757.5MANE Select v0.95Ensembl CanonicalGENCODE basicTSL:5
ENST00000629335.2EHMT1-2213600556aaENSP00000490056.1
 
Protein coding
CCDS87721A0A1B0GUD1 -GENCODE basicTSL:5
ENST00000462484.5EHMT1-2042707808aaENSP00000417328.1
 
Protein coding
CCDS56595Q9H9B1-4 -GENCODE basicTSL:1
ENST00000637161.1EHMT1-23650491267aaENSP00000490328.1
 
Protein coding
-A0A1B0GV09 -GENCODE basicAPPRIS P1TSL:5
ENST00000636027.1EHMT1-2283114981aaENSP00000489961.1
 
Protein coding
-A0A1B0GU48 -TSL:5CDS 3' incomplete
ENST00000637318.1EHMT1-2402983126aaENSP00000490611.1
 
Protein coding
-A0A1B0GW12 -GENCODE basicTSL:5
ENST00000637977.1EHMT1-2502167543aaENSP00000490714.1
 
Protein coding
-A0A1B0GVZ8 -TSL:5CDS 5' incomplete
ENST00000626066.2EHMT1-2191297432aaENSP00000485900.1
 
Protein coding
-A0A0D9SEQ1 -TSL:5CDS 5' and 3' incomplete
ENST00000640639.1EHMT1-2521259394aaENSP00000491823.1
 
Protein coding
-A0A1W2PPZ7 -TSL:5CDS 3' incomplete
ENST00000493484.5EHMT1-2161182107aaENSP00000486503.1
 
Protein coding
-A0A0D9SFD7 -GENCODE basicTSL:3
ENST00000629417.1EHMT1-222882134aaENSP00000486857.1
 
Protein coding
-A0A0D9SFS4 -TSL:3CDS 3' incomplete
ENST00000460486.3EHMT1-202818268aaENSP00000486969.1
 
Protein coding
-A0A0D9SFX4 -TSL:5CDS 3' incomplete
ENST00000492232.5EHMT1-215710139aaENSP00000486580.1
 
Protein coding
-A0A0D9SFG7 -TSL:3CDS 3' incomplete
ENST00000630754.2EHMT1-224709137aaENSP00000485933.1
 
Protein coding
-A0A0D9SER3 -TSL:3CDS 3' incomplete
ENST00000482340.5EHMT1-211691117aaENSP00000486748.1
 
Protein coding
-A0A0D9SFM6 -GENCODE basicTSL:5
ENST00000629808.2EHMT1-223689230aaENSP00000485947.1
 
Protein coding
-A0A0D9SER9 -TSL:5CDS 5' and 3' incomplete
ENST00000478940.1EHMT1-210591126aaENSP00000490732.1
 
Protein coding
-A0A1B0GW12 -GENCODE basicTSL:4
ENST00000626216.2EHMT1-220558106aaENSP00000485878.1
 
Protein coding
-A0A0D9SEP2 -TSL:3CDS 3' incomplete
ENST00000465566.2EHMT1-206503167aaENSP00000486261.1
 
Protein coding
-A0A0D9SF38 -TSL:3CDS 5' and 3' incomplete
ENST00000462942.3EHMT1-2057842803aaENSP00000436107.1
 
Nonsense mediated decay
-A0A0C4DGF8 -TSL:2CDS 5' incomplete
ENST00000637261.1EHMT1-2374208277aaENSP00000490815.1
 
Nonsense mediated decay
-A0A1B0GW79 -TSL:5CDS 5' incomplete
ENST00000371394.6EHMT1-201267966aaENSP00000485945.1
 
Nonsense mediated decay
-Q9H9B1-2 -TSL:2
ENST00000637891.1EHMT1-2481930370aaENSP00000490907.1
 
Nonsense mediated decay
-A0A1B0GWF6 -TSL:5CDS 5' incomplete
ENST00000638071.1EHMT1-2511710112aaENSP00000490417.1
 
Nonsense mediated decay
-A0A1B0GV89 -TSL:5CDS 5' incomplete
ENST00000486164.5EHMT1-213781108aaENSP00000486127.1
 
Nonsense mediated decay
-A0A0D9SEY2 -TSL:3CDS 5' incomplete
ENST00000637949.1EHMT1-249575153aaENSP00000489786.1
 
Nonsense mediated decay
-A0A1B0GTP4 -TSL:5CDS 5' incomplete
ENST00000488242.2EHMT1-214789No protein-
 
Processed transcript
---TSL:5
ENST00000472849.1EHMT1-207708No protein-
 
Processed transcript
---TSL:3
ENST00000495657.5EHMT1-218649No protein-
 
Processed transcript
---TSL:5
ENST00000637593.1EHMT1-243100No protein-
 
Processed transcript
---TSL:5
ENST00000636376.1EHMT1-231100No protein-
 
Processed transcript
---TSL:5
ENST00000637655.1EHMT1-244100No protein-
 
Processed transcript
---TSL:5
ENST00000636081.1EHMT1-229100No protein-
 
Processed transcript
---TSL:5
ENST00000636186.1EHMT1-230100No protein-
 
Processed transcript
---TSL:5
ENST00000636565.1EHMT1-235100No protein-
 
Processed transcript
---TSL:5
ENST00000637277.1EHMT1-238100No protein-
 
Processed transcript
---TSL:5
ENST00000635783.1EHMT1-226100No protein-
 
Processed transcript
---TSL:5
ENST00000637407.1EHMT1-242100No protein-
 
Processed transcript
---TSL:5
ENST00000636463.1EHMT1-232100No protein-
 
Processed transcript
---TSL:5
ENST00000635987.1EHMT1-227100No protein-
 
Processed transcript
---TSL:5
ENST00000635741.1EHMT1-225100No protein-
 
Processed transcript
---TSL:5
ENST00000637784.1EHMT1-247100No protein-
 
Processed transcript
---TSL:5
ENST00000636472.1EHMT1-233100No protein-
 
Processed transcript
---TSL:5
ENST00000636526.1EHMT1-234100No protein-
 
Processed transcript
---TSL:5
ENST00000637287.1EHMT1-239100No protein-
 
Processed transcript
---TSL:5
ENST00000637662.1EHMT1-24589No protein-
 
Processed transcript
---TSL:5
ENST00000637335.1EHMT1-24186No protein-
 
Processed transcript
---TSL:5
ENST00000475564.5EHMT1-2082782No protein-
 
Retained intron
---TSL:1
ENST00000494249.5EHMT1-2172038No protein-
 
Retained intron
---TSL:1
ENST00000637748.1EHMT1-2462006No protein-
 
Retained intron
---TSL:5
ENST00000475704.2EHMT1-209756No protein-
 
Retained intron
---TSL:2
ENST00000483653.1EHMT1-212437No protein-
 
Retained intron
---TSL:2
Description

sphingomyelin phosphodiesterase 4 [Source:MGI Symbol;Acc:MGI:1924876]

Gene Synonyms

4122402O22Rik, neutral membrane (neutral sphingomyelinase-3)

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000006053.13Smpd4-2014623823aaENSMUSP00000006053.7
 
Protein coding
CCDS28009Q6ZPR5-1 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000090159.13Smpd4-2024565807aaENSMUSP00000087620.5
 
Protein coding
CCDS49780Q6ZPR5-4 GENCODE basicTSL:1
ENSMUST00000163476.10Smpd4-2034532794aaENSMUSP00000131867.2
 
Protein coding
CCDS49781Q6ZPR5-2 GENCODE basicTSL:1
ENSMUST00000165363.10Smpd4-2043046793aaENSMUSP00000130720.2
 
Protein coding
CCDS49779Q6ZPR5-3 GENCODE basicTSL:1
ENSMUST00000231436.2Smpd4-2082256751aaENSMUSP00000155897.2
 
Protein coding
-A0A338P695 GENCODE basic
ENSMUST00000232021.2Smpd4-2152166721aaENSMUSP00000156079.2
 
Protein coding
-A0A338P6S3 GENCODE basic
ENSMUST00000231792.2Smpd4-2121722573aaENSMUSP00000156362.2
 
Protein coding
-A0A338P7L1 GENCODE basic
ENSMUST00000232271.2Smpd4-2201672499aaENSMUSP00000156215.2
 
Protein coding
-A0A338P735 GENCODE basic
ENSMUST00000231311.2Smpd4-206509128aaENSMUSP00000156127.2
 
Protein coding
-A0A338P6U9 CDS 3' incomplete
ENSMUST00000231257.2Smpd4-205497125aaENSMUSP00000156136.2
 
Protein coding
-A0A338P6W7 CDS 3' incomplete
ENSMUST00000232442.2Smpd4-222472110aaENSMUSP00000155910.2
 
Protein coding
-A0A338P6B0 CDS 3' incomplete
ENSMUST00000232043.2Smpd4-21646082aaENSMUSP00000156353.2
 
Protein coding
-A0A338P7A7 CDS 3' incomplete
ENSMUST00000231887.2Smpd4-21327027aaENSMUSP00000155917.2
 
Protein coding
-A0A338P6E2 CDS 3' incomplete
ENSMUST00000231627.2Smpd4-209232950aaENSMUSP00000156051.2
 
Nonsense mediated decay
-A0A338P715 -
ENSMUST00000231722.2Smpd4-210213655aaENSMUSP00000156043.2
 
Nonsense mediated decay
-A0A338P6P4 -
ENSMUST00000232116.2Smpd4-21792192aaENSMUSP00000155998.2
 
Nonsense mediated decay
-A0A338P6I0 -
ENSMUST00000232185.2Smpd4-218916No protein-
 
Processed transcript
---
ENSMUST00000231736.2Smpd4-211516No protein-
 
Processed transcript
---
ENSMUST00000232417.2Smpd4-2215017No protein-
 
Retained intron
---
ENSMUST00000232578.2Smpd4-2252915No protein-
 
Retained intron
---
ENSMUST00000232468.2Smpd4-2232446No protein-
 
Retained intron
---
ENSMUST00000231378.2Smpd4-207874No protein-
 
Retained intron
---
ENSMUST00000232270.2Smpd4-219793No protein-
 
Retained intron
---
ENSMUST00000231949.2Smpd4-214626No protein-
 
Retained intron
---
ENSMUST00000232487.2Smpd4-224444No protein-
 
Retained intron
---
Statistics

Exons: 6, Coding exons: 5, Transcript length: 497 bps, Translation length: 125 residues

Incomplete CDS

CDS 3' incomplete

Version

ENSMUST00000231257.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays

    HASH(0x2890b820)