Mouse (GRCm39)
Description

regulatory factor X, 5 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1858421]

Location
About this transcript

This transcript has 4 exons, is associated with 435 variant alleles and maps to 93 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000137088.8Rfx5-2074333658aaENSMUSP00000117963.2
 
Protein coding
CCDS17598Q9JL61 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENSMUST00000107254.8Rfx5-2034450303aaENSMUSP00000102875.2
 
Protein coding
Q6DI69 GENCODE basicTSL:1
ENSMUST00000107253.8Rfx5-2024367303aaENSMUSP00000102874.2
 
Protein coding
Q6DI69 GENCODE basicTSL:1
ENSMUST00000029772.3Rfx5-2014189658aaENSMUSP00000029772.3
 
Protein coding
CCDS17598Q9JL61 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000107260.9Rfx5-2052355658aaENSMUSP00000102881.3
 
Protein coding
CCDS17598Q9JL61 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000107255.8Rfx5-2042350658aaENSMUSP00000102876.2
 
Protein coding
CCDS17598Q9JL61 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000147237.8Rfx5-215882181aaENSMUSP00000118586.2
 
Protein coding
D3Z0D4 TSL:5CDS 3' incomplete
ENSMUST00000145031.8Rfx5-213565105aaENSMUSP00000118099.2
 
Protein coding
D3YZK7 TSL:5CDS 3' incomplete
ENSMUST00000152869.8Rfx5-21753890aaENSMUSP00000121157.2
 
Protein coding
D3YTK4 TSL:5CDS 3' incomplete
ENSMUST00000132393.8Rfx5-20653695aaENSMUSP00000117999.2
 
Protein coding
D3YVW1 TSL:5CDS 3' incomplete
ENSMUST00000142311.8Rfx5-210486131aaENSMUSP00000119704.2
 
Protein coding
K4DI79 TSL:3CDS 3' incomplete
ENSMUST00000144132.8Rfx5-212401441aaENSMUSP00000114908.2
 
Nonsense mediated decay
D6RDE5 TSL:1
ENSMUST00000140331.8Rfx5-20970541aaENSMUSP00000118014.2
 
Nonsense mediated decay
D6RDE5 TSL:3
ENSMUST00000145472.8Rfx5-21452541aaENSMUSP00000116675.2
 
Nonsense mediated decay
D6RDE5 TSL:5
ENSMUST00000140294.8Rfx5-208346No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000148803.8Rfx5-2164139No protein-
 
Retained intron
-TSL:2
ENSMUST00000142708.2Rfx5-211680No protein-
 
Retained intron
-TSL:5
Statistics

Exons: 4, Coding exons: 0, Transcript length: 680 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000142708.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.