Mouse (GRCm39)
Description

ubiquitin specific peptidase 40 [Source:MGI Symbol;Acc:MGI:2443184]

Gene Synonyms

B230215L03Rik

Location
About this transcript

This transcript has 13 exons, is associated with 1352 variant alleles and maps to 230 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000187758.7Usp40-20439771235aaENSMUSP00000140107.2
 
Protein coding
CCDS78645Q8BWR4 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000040783.11Usp40-20150491146aaENSMUSP00000038533.5
 
Protein coding
CCDS15137Q8BWR4-2 GENCODE basicTSL:1
ENSMUST00000189409.7Usp40-207463342aaENSMUSP00000140240.2
 
Nonsense mediated decay
A0A087WQL1 TSL:1CDS 5' incomplete
ENSMUST00000188332.7Usp40-206410971aaENSMUSP00000140574.2
 
Nonsense mediated decay
A0A087WRD2 TSL:1
ENSMUST00000187871.2Usp40-2052335No protein-
 
Retained intron
-TSL:NA
ENSMUST00000190446.2Usp40-2092179No protein-
 
Retained intron
-TSL:NA
ENSMUST00000186315.2Usp40-2021725No protein-
 
Retained intron
-TSL:1
ENSMUST00000189586.2Usp40-2081661No protein-
 
Retained intron
-TSL:1
ENSMUST00000186670.2Usp40-203571No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 13, Coding exons: 2, Transcript length: 4,633 bps, Translation length: 42 residues

Transcript Support Level (TSL)

TSL:1

Incomplete CDS

CDS 5' incomplete

Version

ENSMUST00000189409.7

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.