Mouse (GRCm39)
Description

Rho guanine nucleotide exchange factor (GEF) 40 [Source:MGI Symbol;Acc:MGI:2685515]

Gene Synonyms

E130112L23Rik

Location
About this transcript

This transcript has 4 exons, is associated with 708 variant alleles and maps to 104 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000182760.8Arhgef40-21651301526aaENSMUSP00000138125.2
 
Protein coding
S4R189 Ensembl CanonicalGENCODE basicTSL:5
ENSMUST00000093813.12Arhgef40-20156211517aaENSMUSP00000091331.5
 
Protein coding
CCDS49488Q3UPH7 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000182909.8Arhgef40-22051081517aaENSMUSP00000138635.2
 
Protein coding
CCDS49488Q3UPH7 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000100639.11Arhgef40-20248431476aaENSMUSP00000098204.4
 
Protein coding
CCDS49489Q3UPH7-2 GENCODE basicTSL:1
ENSMUST00000182061.8Arhgef40-20447561469aaENSMUSP00000138128.2
 
Protein coding
CCDS59616Q3UPH7-3 GENCODE basicTSL:1
ENSMUST00000182667.8Arhgef40-214827179aaENSMUSP00000138424.2
 
Protein coding
S4R1Y4 TSL:3CDS 5' incomplete
ENSMUST00000182217.8Arhgef40-206638115aaENSMUSP00000138568.2
 
Protein coding
S4R2A6 TSL:5CDS 5' incomplete
ENSMUST00000182828.2Arhgef40-21860873aaENSMUSP00000138339.2
 
Protein coding
S4R1R5 TSL:3CDS 5' incomplete
ENSMUST00000182193.2Arhgef40-20539389aaENSMUSP00000138751.2
 
Protein coding
S4R2R3 TSL:5CDS 3' incomplete
ENSMUST00000182905.8Arhgef40-21953201191aaENSMUSP00000138797.2
 
Nonsense mediated decay
S4R2U9 TSL:1
ENSMUST00000183208.8Arhgef40-2254826500aaENSMUSP00000138354.2
 
Nonsense mediated decay
S4R1S6 TSL:5
ENSMUST00000182412.2Arhgef40-20882245aaENSMUSP00000138405.2
 
Nonsense mediated decay
S4R1X0 TSL:3CDS 5' incomplete
ENSMUST00000182338.2Arhgef40-20781285aaENSMUSP00000138482.2
 
Nonsense mediated decay
S4R237 TSL:3
ENSMUST00000182649.8Arhgef40-21375144aaENSMUSP00000138638.2
 
Nonsense mediated decay
S4R2G8 TSL:5
ENSMUST00000182480.8Arhgef40-209461No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000182961.2Arhgef40-2222903No protein-
 
Retained intron
-TSL:1
ENSMUST00000182740.2Arhgef40-2152191No protein-
 
Retained intron
-TSL:1
ENSMUST00000182644.8Arhgef40-2121429No protein-
 
Retained intron
-TSL:1
ENSMUST00000183167.2Arhgef40-224924No protein-
 
Retained intron
-TSL:3
ENSMUST00000182609.2Arhgef40-211848No protein-
 
Retained intron
-TSL:3
ENSMUST00000182931.2Arhgef40-221820No protein-
 
Retained intron
-TSL:5
ENSMUST00000182777.2Arhgef40-217676No protein-
 
Retained intron
-TSL:3
ENSMUST00000183213.2Arhgef40-226515No protein-
 
Retained intron
-TSL:2
ENSMUST00000182504.2Arhgef40-210478No protein-
 
Retained intron
-TSL:3
ENSMUST00000183022.2Arhgef40-223387No protein-
 
Retained intron
-TSL:3
ENSMUST00000182019.2Arhgef40-203336No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,191 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000182740.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.