Mouse (GRCm39)
Description

Rho guanine nucleotide exchange factor (GEF) 40 [Source:MGI Symbol;Acc:MGI:2685515]

Gene Synonyms

E130112L23Rik

Location
About this transcript

This transcript has 24 exons, is annotated with 35 domains and features, is associated with 1471 variant alleles and maps to 315 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000182760.8Arhgef40-21651301526aaENSMUSP00000138125.2
 
Protein coding
S4R189 Ensembl CanonicalGENCODE basicTSL:5
ENSMUST00000093813.12Arhgef40-20156211517aaENSMUSP00000091331.5
 
Protein coding
CCDS49488Q3UPH7 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000182909.8Arhgef40-22051081517aaENSMUSP00000138635.2
 
Protein coding
CCDS49488Q3UPH7 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000100639.11Arhgef40-20248431476aaENSMUSP00000098204.4
 
Protein coding
CCDS49489Q3UPH7-2 GENCODE basicTSL:1
ENSMUST00000182061.8Arhgef40-20447561469aaENSMUSP00000138128.2
 
Protein coding
CCDS59616Q3UPH7-3 GENCODE basicTSL:1
ENSMUST00000182667.8Arhgef40-214827179aaENSMUSP00000138424.2
 
Protein coding
S4R1Y4 TSL:3CDS 5' incomplete
ENSMUST00000182217.8Arhgef40-206638115aaENSMUSP00000138568.2
 
Protein coding
S4R2A6 TSL:5CDS 5' incomplete
ENSMUST00000182828.2Arhgef40-21860873aaENSMUSP00000138339.2
 
Protein coding
S4R1R5 TSL:3CDS 5' incomplete
ENSMUST00000182193.2Arhgef40-20539389aaENSMUSP00000138751.2
 
Protein coding
S4R2R3 TSL:5CDS 3' incomplete
ENSMUST00000182905.8Arhgef40-21953201191aaENSMUSP00000138797.2
 
Nonsense mediated decay
S4R2U9 TSL:1
ENSMUST00000183208.8Arhgef40-2254826500aaENSMUSP00000138354.2
 
Nonsense mediated decay
S4R1S6 TSL:5
ENSMUST00000182412.2Arhgef40-20882245aaENSMUSP00000138405.2
 
Nonsense mediated decay
S4R1X0 TSL:3CDS 5' incomplete
ENSMUST00000182338.2Arhgef40-20781285aaENSMUSP00000138482.2
 
Nonsense mediated decay
S4R237 TSL:3
ENSMUST00000182649.8Arhgef40-21375144aaENSMUSP00000138638.2
 
Nonsense mediated decay
S4R2G8 TSL:5
ENSMUST00000182480.8Arhgef40-209461No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000182961.2Arhgef40-2222903No protein-
 
Retained intron
-TSL:1
ENSMUST00000182740.2Arhgef40-2152191No protein-
 
Retained intron
-TSL:1
ENSMUST00000182644.8Arhgef40-2121429No protein-
 
Retained intron
-TSL:1
ENSMUST00000183167.2Arhgef40-224924No protein-
 
Retained intron
-TSL:3
ENSMUST00000182609.2Arhgef40-211848No protein-
 
Retained intron
-TSL:3
ENSMUST00000182931.2Arhgef40-221820No protein-
 
Retained intron
-TSL:5
ENSMUST00000182777.2Arhgef40-217676No protein-
 
Retained intron
-TSL:3
ENSMUST00000183213.2Arhgef40-226515No protein-
 
Retained intron
-TSL:2
ENSMUST00000182504.2Arhgef40-210478No protein-
 
Retained intron
-TSL:3
ENSMUST00000183022.2Arhgef40-223387No protein-
 
Retained intron
-TSL:3
ENSMUST00000182019.2Arhgef40-203336No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 24, Coding exons: 23, Transcript length: 4,843 bps, Translation length: 1,476 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3UPH7

CCDS

This transcript is a member of the Mouse CCDS set: CCDS49489

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000100639.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.