Mouse (GRCm39)
Description

tRNA methyltransferase 1 [Source:MGI Symbol;Acc:MGI:1289155]

Gene Synonyms

6720406L13Rik, D8Ertd812e

Location
About this transcript

This transcript has 17 exons, is annotated with 19 domains and features, is associated with 889 variant alleles and maps to 331 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000001974.11Trmt1-2012567663aaENSMUSP00000001974.5
 
Protein coding
CCDS40410A0A0R4IZW7 Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENSMUST00000109767.9Trmt1-2032138663aaENSMUSP00000105389.3
 
Protein coding
CCDS40410A0A0R4IZW7 GENCODE basicAPPRIS P2TSL:1
ENSMUST00000125370.10Trmt1-2052114634aaENSMUSP00000135510.2
 
Protein coding
H3BKS8 GENCODE basicTSL:5
ENSMUST00000109768.9Trmt1-2042044656aaENSMUSP00000105390.3
 
Protein coding
CCDS52619E9PWD4 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000177084.8Trmt1-225921260aaENSMUSP00000135675.2
 
Protein coding
H3BL70 TSL:3CDS 3' incomplete
ENSMUST00000177531.8Trmt1-230902173aaENSMUSP00000135540.2
 
Protein coding
H3BKV3 TSL:5CDS 3' incomplete
ENSMUST00000175784.2Trmt1-219840221aaENSMUSP00000135273.2
 
Protein coding
H3BK68 TSL:5CDS 3' incomplete
ENSMUST00000152301.9Trmt1-216825242aaENSMUSP00000116712.3
 
Protein coding
D3Z413 TSL:5CDS 3' incomplete
ENSMUST00000177423.8Trmt1-229817262aaENSMUSP00000135327.2
 
Protein coding
H3BKB8 TSL:5CDS 3' incomplete
ENSMUST00000136423.3Trmt1-210638205aaENSMUSP00000134723.2
 
Protein coding
G3V019 TSL:3CDS 5' incomplete
ENSMUST00000131700.8Trmt1-2091104114aaENSMUSP00000122526.2
 
Nonsense mediated decay
D6RG86 TSL:5
ENSMUST00000143427.8Trmt1-213810103aaENSMUSP00000117140.2
 
Nonsense mediated decay
D6RFC0 TSL:5
ENSMUST00000175884.3Trmt1-22150567aaENSMUSP00000135680.3
 
Nonsense mediated decay
H3BL74 TSL:5CDS 5' incomplete
ENSMUST00000128022.9Trmt1-207904No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000077990.11Trmt1-202895No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000177286.8Trmt1-227864No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000176914.2Trmt1-224502No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000175870.8Trmt1-220421No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000176053.8Trmt1-223384No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000137953.8Trmt1-2113647No protein-
 
Retained intron
-TSL:2
ENSMUST00000175980.8Trmt1-2221014No protein-
 
Retained intron
-TSL:3
ENSMUST00000127915.8Trmt1-206980No protein-
 
Retained intron
-TSL:2
ENSMUST00000128537.9Trmt1-208871No protein-
 
Retained intron
-TSL:5
ENSMUST00000148118.3Trmt1-214846No protein-
 
Retained intron
-TSL:2
ENSMUST00000150085.9Trmt1-215665No protein-
 
Retained intron
-TSL:2
ENSMUST00000175767.2Trmt1-218502No protein-
 
Retained intron
-TSL:2
ENSMUST00000138300.2Trmt1-212463No protein-
 
Retained intron
-TSL:3
ENSMUST00000175704.2Trmt1-217462No protein-
 
Retained intron
-TSL:3
ENSMUST00000177364.2Trmt1-228435No protein-
 
Retained intron
-TSL:2
ENSMUST00000177260.2Trmt1-226339No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 17, Coding exons: 16, Transcript length: 2,138 bps, Translation length: 663 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS40410

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000109767.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.