Gene: Khdrbs3 ENSMUSG00000022332

Description

KH domain containing, RNA binding, signal transduction associated 3 [Source:MGI Symbol;Acc:MGI:1313312]

Gene Synonyms

Etle, SLM-2, Salp, T-STAR

Location

Chromosome 15: 68,800,269-68,973,060 forward strand.

GRCm39:CM001008.3

About this gene

This gene has 6 transcripts (splice variants), 215 orthologues, 4 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000022954.7	Khdrbs3-201	1887	346aa	ENSMUSP00000022954.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27513	Q9R226	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000230847.2	Khdrbs3-206	1344	258aa	ENSMUSP00000154871.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VJR4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000230073.2	Khdrbs3-205	501	126aa	ENSMUSP00000155218.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VHM1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000229234.2	Khdrbs3-202	2861	346aa	ENSMUSP00000154887.2	Nonsense mediated decay	CCDS27513	Q9R226	-
ENSMUST00000229683.2	Khdrbs3-204	1740	346aa	ENSMUSP00000155136.2	Nonsense mediated decay	CCDS27513	Q9R226	-
ENSMUST00000229534.2	Khdrbs3-203	688	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Gene: Khdrbs3 ENSMUSG00000022332

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: Khdrbs3 ENSMUSG00000022332

Summary

About Us

Get help

Our sister sites

Follow us