Human (GRCh38.p14)
Description

hepatocellular carcinoma up-regulated long non-coding RNA [Source:HGNC Symbol;Acc:HGNC:34232]

Gene Synonyms

HCCAT1, LINC00078, NCRNA00078

Location
About this transcript

This transcript has 7 exons, is associated with 148850 variant alleles and maps to 280 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000645747.1HULC-2701783No protein-
 
lncRNA
-Ensembl CanonicalGENCODE basic
ENST00000642357.1HULC-2073568No protein-
 
lncRNA
-GENCODE basic
ENST00000644837.1HULC-2553529No protein-
 
lncRNA
-GENCODE basic
ENST00000646231.1HULC-2843469No protein-
 
lncRNA
-GENCODE basic
ENST00000643788.1HULC-2363387No protein-
 
lncRNA
-GENCODE basic
ENST00000645474.1HULC-2663341No protein-
 
lncRNA
--
ENST00000643985.1HULC-2413302No protein-
 
lncRNA
-GENCODE basic
ENST00000645379.1HULC-2643277No protein-
 
lncRNA
-GENCODE basic
ENST00000646996.1HULC-3053163No protein-
 
lncRNA
-GENCODE basic
ENST00000643058.1HULC-2183147No protein-
 
lncRNA
-GENCODE basic
ENST00000643136.1HULC-2213133No protein-
 
lncRNA
-GENCODE basic
ENST00000643126.1HULC-2203014No protein-
 
lncRNA
-GENCODE basic
ENST00000643036.1HULC-2172976No protein-
 
lncRNA
--
ENST00000645365.1HULC-2632976No protein-
 
lncRNA
-GENCODE basic
ENST00000642163.1HULC-2032936No protein-
 
lncRNA
-GENCODE basic
ENST00000646490.1HULC-2922925No protein-
 
lncRNA
--
ENST00000645344.1HULC-2622883No protein-
 
lncRNA
-GENCODE basic
ENST00000646431.1HULC-2902882No protein-
 
lncRNA
-GENCODE basic
ENST00000647365.1HULC-3122851No protein-
 
lncRNA
-GENCODE basic
ENST00000645047.1HULC-2582843No protein-
 
lncRNA
--
ENST00000645808.1HULC-2742836No protein-
 
lncRNA
-GENCODE basic
ENST00000644654.1HULC-2522821No protein-
 
lncRNA
--
ENST00000645464.1HULC-2652806No protein-
 
lncRNA
--
ENST00000645976.1HULC-2802805No protein-
 
lncRNA
--
ENST00000645486.1HULC-2672793No protein-
 
lncRNA
--
ENST00000643545.1HULC-2322777No protein-
 
lncRNA
--
ENST00000646792.1HULC-3012638No protein-
 
lncRNA
--
ENST00000646295.1HULC-2862635No protein-
 
lncRNA
--
ENST00000646718.1HULC-2952611No protein-
 
lncRNA
--
ENST00000644248.1HULC-2462604No protein-
 
lncRNA
--
ENST00000645611.1HULC-2682563No protein-
 
lncRNA
--
ENST00000643473.1HULC-2302543No protein-
 
lncRNA
--
ENST00000646007.1HULC-2812528No protein-
 
lncRNA
-GENCODE basic
ENST00000644778.1HULC-2532466No protein-
 
lncRNA
--
ENST00000642534.1HULC-2092463No protein-
 
lncRNA
--
ENST00000646521.1HULC-2932415No protein-
 
lncRNA
-GENCODE basic
ENST00000646876.1HULC-3032369No protein-
 
lncRNA
--
ENST00000642760.1HULC-2132257No protein-
 
lncRNA
--
ENST00000646073.1HULC-2832225No protein-
 
lncRNA
--
ENST00000647156.1HULC-3092218No protein-
 
lncRNA
-GENCODE basic
ENST00000701974.1HULC-3222160No protein-
 
lncRNA
-GENCODE basic
ENST00000642798.1HULC-2142151No protein-
 
lncRNA
--
ENST00000644363.1HULC-2472079No protein-
 
lncRNA
--
ENST00000645322.1HULC-2612060No protein-
 
lncRNA
--
ENST00000642666.2HULC-2122016No protein-
 
lncRNA
--
ENST00000643311.1HULC-2251856No protein-
 
lncRNA
-GENCODE basic
ENST00000644892.1HULC-2561844No protein-
 
lncRNA
--
ENST00000643761.1HULC-2351831No protein-
 
lncRNA
--
ENST00000644070.1HULC-2431727No protein-
 
lncRNA
-GENCODE basic
ENST00000645796.1HULC-2731714No protein-
 
lncRNA
--
ENST00000645087.1HULC-2591694No protein-
 
lncRNA
--
ENST00000644213.2HULC-2451686No protein-
 
lncRNA
--
ENST00000642859.1HULC-2151641No protein-
 
lncRNA
--
ENST00000702170.1HULC-3251630No protein-
 
lncRNA
-GENCODE basic
ENST00000644038.1HULC-2421623No protein-
 
lncRNA
--
ENST00000643259.1HULC-2241599No protein-
 
lncRNA
-GENCODE basic
ENST00000645715.1HULC-2691596No protein-
 
lncRNA
--
ENST00000642622.1HULC-2101569No protein-
 
lncRNA
-GENCODE basic
ENST00000647466.1HULC-3131556No protein-
 
lncRNA
-GENCODE basic
ENST00000643141.1HULC-2221547No protein-
 
lncRNA
--
ENST00000646706.1HULC-2941542No protein-
 
lncRNA
--
ENST00000642458.1HULC-2081528No protein-
 
lncRNA
--
ENST00000645820.1HULC-2751505No protein-
 
lncRNA
--
ENST00000643635.1HULC-2341490No protein-
 
lncRNA
--
ENST00000643526.1HULC-2311458No protein-
 
lncRNA
--
ENST00000643571.1HULC-2331457No protein-
 
lncRNA
--
ENST00000646403.1HULC-2881429No protein-
 
lncRNA
--
ENST00000702251.1HULC-3261428No protein-
 
lncRNA
--
ENST00000701034.1HULC-3181426No protein-
 
lncRNA
--
ENST00000702052.1HULC-3231424No protein-
 
lncRNA
-GENCODE basic
ENST00000643938.1HULC-2391412No protein-
 
lncRNA
--
ENST00000644364.1HULC-2481396No protein-
 
lncRNA
--
ENST00000646488.1HULC-2911368No protein-
 
lncRNA
--
ENST00000646749.1HULC-2971339No protein-
 
lncRNA
--
ENST00000645758.1HULC-2721337No protein-
 
lncRNA
--
ENST00000701010.1HULC-3171334No protein-
 
lncRNA
--
ENST00000645940.1HULC-2781330No protein-
 
lncRNA
--
ENST00000645970.1HULC-2791317No protein-
 
lncRNA
--
ENST00000643404.1HULC-2261296No protein-
 
lncRNA
--
ENST00000647175.1HULC-3101288No protein-
 
lncRNA
--
ENST00000645017.1HULC-2571286No protein-
 
lncRNA
--
ENST00000645925.1HULC-2771281No protein-
 
lncRNA
--
ENST00000644610.1HULC-2511274No protein-
 
lncRNA
--
ENST00000642345.1HULC-2061274No protein-
 
lncRNA
--
ENST00000647306.1HULC-3111269No protein-
 
lncRNA
--
ENST00000643414.1HULC-2271252No protein-
 
lncRNA
--
ENST00000644111.1HULC-2441238No protein-
 
lncRNA
-GENCODE basic
ENST00000644441.1HULC-2491226No protein-
 
lncRNA
--
ENST00000647039.1HULC-3061218No protein-
 
lncRNA
-GENCODE basic
ENST00000647052.1HULC-3071214No protein-
 
lncRNA
--
ENST00000643431.1HULC-2291208No protein-
 
lncRNA
--
ENST00000644800.1HULC-2541205No protein-
 
lncRNA
--
ENST00000645750.1HULC-2711204No protein-
 
lncRNA
--
ENST00000647135.1HULC-3081196No protein-
 
lncRNA
--
ENST00000643415.1HULC-2281191No protein-
 
lncRNA
--
ENST00000643083.1HULC-2191184No protein-
 
lncRNA
--
ENST00000645321.1HULC-2601171No protein-
 
lncRNA
--
ENST00000646406.1HULC-2891167No protein-
 
lncRNA
--
ENST00000665267.1HULC-3141161No protein-
 
lncRNA
--
ENST00000643953.1HULC-2401150No protein-
 
lncRNA
--
ENST00000646868.1HULC-3021145No protein-
 
lncRNA
-GENCODE basic
ENST00000646741.1HULC-2961145No protein-
 
lncRNA
--
ENST00000642340.1HULC-2051127No protein-
 
lncRNA
--
ENST00000701376.1HULC-3211108No protein-
 
lncRNA
--
ENST00000702144.1HULC-3241107No protein-
 
lncRNA
--
ENST00000642665.1HULC-2111103No protein-
 
lncRNA
--
ENST00000642877.1HULC-2161077No protein-
 
lncRNA
--
ENST00000645863.1HULC-2761069No protein-
 
lncRNA
--
ENST00000642168.1HULC-2041055No protein-
 
lncRNA
--
ENST00000643201.1HULC-223979No protein-
 
lncRNA
-GENCODE basic
ENST00000646043.1HULC-282958No protein-
 
lncRNA
--
ENST00000693633.1HULC-316958No protein-
 
lncRNA
--
ENST00000646981.1HULC-304948No protein-
 
lncRNA
--
ENST00000503668.2HULC-202947No protein-
 
lncRNA
-TSL:1
ENST00000702332.1HULC-327936No protein-
 
lncRNA
--
ENST00000643889.1HULC-238919No protein-
 
lncRNA
--
ENST00000701356.1HULC-320906No protein-
 
lncRNA
--
ENST00000644605.1HULC-250896No protein-
 
lncRNA
-GENCODE basic
ENST00000643832.1HULC-237890No protein-
 
lncRNA
-GENCODE basic
ENST00000701300.1HULC-319881No protein-
 
lncRNA
--
ENST00000646774.1HULC-299782No protein-
 
lncRNA
--
ENST00000646758.1HULC-298734No protein-
 
lncRNA
-GENCODE basic
ENST00000646377.1HULC-287696No protein-
 
lncRNA
--
ENST00000665625.1HULC-315664No protein-
 
lncRNA
--
ENST00000429060.2HULC-201612No protein-
 
lncRNA
-TSL:2
ENST00000646784.1HULC-300581No protein-
 
lncRNA
-GENCODE basic
ENST00000646294.1HULC-285561No protein-
 
lncRNA
--
Statistics

Exons: 7, Coding exons: 0, Transcript length: 2,925 bps,

Version

ENST00000646490.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]