Transcript: ENST00000643217.1 HSF1-219

Description

heat shock transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:5224]

Gene Synonyms

HSTF1

Location

Scaffold HG2419_PATCH: 22,194-45,271 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 16 domains and features and maps to 716 oligo probes.

Gene

This transcript is a product of gene ENSG00000284774.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000646252.2	HSF1-226	2134	529aa	ENSP00000493830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q00613-1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000643217.1	HSF1-219	2105	495aa	ENSP00000494234.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000643086.1	HSF1-217	561	138aa	ENSP00000495787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000642717.1	HSF1-216	775	64aa	ENSP00000495078.1	Nonsense mediated decay	-	-	-
ENST00000643951.1	HSF1-221	684	91aa	ENSP00000494531.1	Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000646970.1	HSF1-228	552	47aa	ENSP00000495094.1	Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000644444.1	HSF1-222	3451	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000644450.1	HSF1-223	2336	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000643099.1	HSF1-218	1724	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000646061.1	HSF1-224	935	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000643870.1	HSF1-220	659	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000646807.1	HSF1-227	646	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000646233.1	HSF1-225	493	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000642697.1	HSF1-215	364	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,105 bps, Translation length: 495 residues

Version

ENST00000643217.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000643217.1 HSF1-219

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Transcript: ENST00000643217.1 HSF1-219

Summary

About Us

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