Human (GRCh38.p14)
Description

VPS53 subunit of GARP complex [Source:HGNC Symbol;Acc:HGNC:25608]

Gene Synonyms

FLJ10979, HCCS1

About this transcript

This transcript has 1 exon and maps to 74 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000639801.2VPS53-28513089832aaENSP00000492761.1
 
Protein coding
Q5VIR6-4 -Ensembl CanonicalGENCODE basic
ENST00000638350.1VPS53-2742656670aaENSP00000492070.1
 
Protein coding
Q5VIR6-2 -GENCODE basic
ENST00000639896.1VPS53-2862356699aaENSP00000492119.1
 
Protein coding
Q5VIR6-1 -GENCODE basic
ENST00000640337.1VPS53-2901269422aaENSP00000491498.1
 
Protein coding
--GENCODE basic
ENST00000639574.1VPS53-282729237aaENSP00000492845.1
 
Protein coding
--CDS 5' incomplete
ENST00000639488.1VPS53-28161368aaENSP00000490995.1
 
Protein coding
--CDS 3' incomplete
ENST00000640127.1VPS53-288585145aaENSP00000492430.1
 
Protein coding
--GENCODE basic
ENST00000638884.1VPS53-2763204216aaENSP00000492603.1
 
Nonsense mediated decay
---
ENST00000639641.1VPS53-2831903547aaENSP00000492696.1
 
Nonsense mediated decay
---
ENST00000638912.1VPS53-2772444No protein-
 
Protein coding CDS not defined
---
ENST00000638197.1VPS53-273744No protein-
 
Protein coding CDS not defined
---
ENST00000639944.1VPS53-287575No protein-
 
Protein coding CDS not defined
---
ENST00000638530.1VPS53-275570No protein-
 
Protein coding CDS not defined
---
ENST00000639449.1VPS53-280561No protein-
 
Protein coding CDS not defined
---
ENST00000640863.1VPS53-291494No protein-
 
Protein coding CDS not defined
---
ENST00000639376.1VPS53-2792781No protein-
 
Retained intron
---
ENST00000639795.1VPS53-2841972No protein-
 
Retained intron
---
ENST00000640193.1VPS53-289732No protein-
 
Retained intron
---
ENST00000640902.1VPS53-292683No protein-
 
Retained intron
---
ENST00000639231.1VPS53-278366No protein-
 
Retained intron
---
Statistics

Exons: 1, Coding exons: 0, Transcript length: 2,781 bps,

Version

ENST00000639376.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.