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EnsemblEnsembl Home
Description

transient receptor potential cation channel, subfamily M, member 1 [Source:MGI Symbol;Acc:MGI:1330305]

Gene Synonyms

4732499L03Rik, LTRPC1, Mlsn1, melastatin

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Trpm1-201ENSMUST00000085222.1257111622aaENSMUSP00000082318.6
 
Protein coding
CCDS21332Q2TV84-1 GENCODE basicAPPRIS P2TSL:1
Trpm1-202ENSMUST00000177102.82928542aaENSMUSP00000134947.3
 
Protein coding
CCDS39975Q2TV84-3 GENCODE basicTSL:1
Trpm1-217ENSMUST00000206263.254931506aaENSMUSP00000146140.2
 
Protein coding
-A0A0U1RPV6 GENCODE basicAPPRIS ALT2TSL:5
Trpm1-218ENSMUST00000206277.250761628aaENSMUSP00000146226.2
 
Protein coding
-A0A0U1RQ32 GENCODE basicAPPRIS ALT2TSL:5
Trpm1-210ENSMUST00000205731.22575443aaENSMUSP00000145776.2
 
Protein coding
-Q2TV84-4 GENCODE basicTSL:1
Trpm1-221ENSMUST00000206706.22350426aaENSMUSP00000146265.2
 
Protein coding
-Q2TV84-5 GENCODE basicTSL:1
Trpm1-219ENSMUST00000206314.22323738aaENSMUSP00000145593.2
 
Protein coding
-Q2TV84-2 GENCODE basicTSL:1
Trpm1-223ENSMUST00000206848.2795153aaENSMUSP00000146073.2
 
Protein coding
-A0A0U1RPQ0 TSL:3CDS 3' incomplete
Trpm1-216ENSMUST00000206107.265328aaENSMUSP00000146257.2
 
Protein coding
-A0A0U1RQ58 TSL:3CDS 3' incomplete
Trpm1-208ENSMUST00000205690.244119aaENSMUSP00000145814.2
 
Protein coding
-A0A0U1RP37 TSL:3CDS 3' incomplete
Trpm1-215ENSMUST00000206049.234620aaENSMUSP00000145995.2
 
Protein coding
-A0A0U1RPI6 TSL:1CDS 5' incomplete
Trpm1-213ENSMUST00000205994.228695aaENSMUSP00000146323.2
 
Protein coding
-A0A0U1RQB3 TSL:1CDS 5' and 3' incomplete
Trpm1-207ENSMUST00000205684.212341aaENSMUSP00000146163.2
 
Protein coding
-A0A0U1RPX6 TSL:1CDS 5' and 3' incomplete
Trpm1-203ENSMUST00000205348.22007461aaENSMUSP00000145708.2
 
Nonsense mediated decay
-A0A0U1RNU7 TSL:1
Trpm1-211ENSMUST00000205939.2534No protein-
 
Processed transcript
--TSL:2
Trpm1-209ENSMUST00000205728.2372No protein-
 
Processed transcript
--TSL:2
Trpm1-220ENSMUST00000206453.2366No protein-
 
Processed transcript
--TSL:1
Trpm1-222ENSMUST00000206740.23349No protein-
 
Retained intron
--TSL:NA
Trpm1-214ENSMUST00000206000.23068No protein-
 
Retained intron
--TSL:1
Trpm1-204ENSMUST00000205434.22765No protein-
 
Retained intron
--TSL:1
Trpm1-212ENSMUST00000205960.21992No protein-
 
Retained intron
--TSL:1
Trpm1-205ENSMUST00000205466.2722No protein-
 
Retained intron
--TSL:2
Trpm1-206ENSMUST00000205610.2529No protein-
 
Retained intron
--TSL:5
Description

syndecan binding protein [Source:MGI Symbol;Acc:MGI:1337026]

Gene Synonyms

MDA-9, Sycl, syndecan interacting protein, syntenin, syntenin-1

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Sdcbp-201ENSMUST00000029912.112745299aaENSMUSP00000029912.5
 
Protein coding
CCDS51110O08992 GENCODE basicAPPRIS ALT1TSL:1
Sdcbp-202ENSMUST00000103008.122086298aaENSMUSP00000100073.6
 
Protein coding
CCDS17951Q3TMX0 GENCODE basicAPPRIS P3TSL:1
Sdcbp-204ENSMUST00000108374.81803199aaENSMUSP00000104011.2
 
Protein coding
-A2AKJ9 GENCODE basicTSL:1
Sdcbp-208ENSMUST00000175769.8975249aaENSMUSP00000135777.2
 
Protein coding
-H3BLG5 TSL:5CDS 3' incomplete
Sdcbp-206ENSMUST00000153861.2697209aaENSMUSP00000119838.2
 
Protein coding
-A2AKJ6 TSL:5CDS 3' incomplete
Sdcbp-205ENSMUST00000140830.850691aaENSMUSP00000122411.2
 
Protein coding
-A2AKJ5 TSL:5CDS 3' incomplete
Sdcbp-207ENSMUST00000155247.22603No protein-
 
Processed transcript
--TSL:1
Sdcbp-203ENSMUST00000108371.4369No protein-
 
Processed transcript
--TSL:5
Description

transient receptor potential cation channel, subfamily M, member 1 [Source:MGI Symbol;Acc:MGI:1330305]

Gene Synonyms

4732499L03Rik, LTRPC1, Mlsn1, melastatin

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Trpm1-201ENSMUST00000085222.1257111622aaENSMUSP00000082318.6
 
Protein coding
CCDS21332Q2TV84-1 GENCODE basicAPPRIS P2TSL:1
Trpm1-202ENSMUST00000177102.82928542aaENSMUSP00000134947.3
 
Protein coding
CCDS39975Q2TV84-3 GENCODE basicTSL:1
Trpm1-217ENSMUST00000206263.254931506aaENSMUSP00000146140.2
 
Protein coding
-A0A0U1RPV6 GENCODE basicAPPRIS ALT2TSL:5
Trpm1-218ENSMUST00000206277.250761628aaENSMUSP00000146226.2
 
Protein coding
-A0A0U1RQ32 GENCODE basicAPPRIS ALT2TSL:5
Trpm1-210ENSMUST00000205731.22575443aaENSMUSP00000145776.2
 
Protein coding
-Q2TV84-4 GENCODE basicTSL:1
Trpm1-221ENSMUST00000206706.22350426aaENSMUSP00000146265.2
 
Protein coding
-Q2TV84-5 GENCODE basicTSL:1
Trpm1-219ENSMUST00000206314.22323738aaENSMUSP00000145593.2
 
Protein coding
-Q2TV84-2 GENCODE basicTSL:1
Trpm1-223ENSMUST00000206848.2795153aaENSMUSP00000146073.2
 
Protein coding
-A0A0U1RPQ0 TSL:3CDS 3' incomplete
Trpm1-216ENSMUST00000206107.265328aaENSMUSP00000146257.2
 
Protein coding
-A0A0U1RQ58 TSL:3CDS 3' incomplete
Trpm1-208ENSMUST00000205690.244119aaENSMUSP00000145814.2
 
Protein coding
-A0A0U1RP37 TSL:3CDS 3' incomplete
Trpm1-215ENSMUST00000206049.234620aaENSMUSP00000145995.2
 
Protein coding
-A0A0U1RPI6 TSL:1CDS 5' incomplete
Trpm1-213ENSMUST00000205994.228695aaENSMUSP00000146323.2
 
Protein coding
-A0A0U1RQB3 TSL:1CDS 5' and 3' incomplete
Trpm1-207ENSMUST00000205684.212341aaENSMUSP00000146163.2
 
Protein coding
-A0A0U1RPX6 TSL:1CDS 5' and 3' incomplete
Trpm1-203ENSMUST00000205348.22007461aaENSMUSP00000145708.2
 
Nonsense mediated decay
-A0A0U1RNU7 TSL:1
Trpm1-211ENSMUST00000205939.2534No protein-
 
Processed transcript
--TSL:2
Trpm1-209ENSMUST00000205728.2372No protein-
 
Processed transcript
--TSL:2
Trpm1-220ENSMUST00000206453.2366No protein-
 
Processed transcript
--TSL:1
Trpm1-222ENSMUST00000206740.23349No protein-
 
Retained intron
--TSL:NA
Trpm1-214ENSMUST00000206000.23068No protein-
 
Retained intron
--TSL:1
Trpm1-204ENSMUST00000205434.22765No protein-
 
Retained intron
--TSL:1
Trpm1-212ENSMUST00000205960.21992No protein-
 
Retained intron
--TSL:1
Trpm1-205ENSMUST00000205466.2722No protein-
 
Retained intron
--TSL:2
Trpm1-206ENSMUST00000205610.2529No protein-
 
Retained intron
--TSL:5
Description

ninein-like [Source:MGI Symbol;Acc:MGI:1925427]

Gene Synonyms

4930519N13Rik, LOC381387, LOC381388

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Ninl-201ENSMUST00000109896.850931394aaENSMUSP00000105522.2
 
Protein coding
CCDS50744Q6ZQ12-3 GENCODE basicAPPRIS P1TSL:5
Ninl-202ENSMUST00000124135.3924308aaENSMUSP00000122069.2
 
Protein coding
-A2ANB6 TSL:3CDS 5' and 3' incomplete
Ninl-209ENSMUST00000150595.2768256aaENSMUSP00000117001.2
 
Protein coding
-A2ANB7 TSL:3CDS 5' and 3' incomplete
Ninl-204ENSMUST00000128627.2658167aaENSMUSP00000121872.2
 
Protein coding
-A2ANB9 TSL:3CDS 3' incomplete
Ninl-206ENSMUST00000149268.8757No protein-
 
Processed transcript
--TSL:3
Ninl-203ENSMUST00000128564.8696No protein-
 
Processed transcript
--TSL:3
Ninl-207ENSMUST00000149979.2617No protein-
 
Processed transcript
--TSL:3
Ninl-208ENSMUST00000150036.2541No protein-
 
Processed transcript
--TSL:5
Ninl-205ENSMUST00000147293.2921No protein-
 
Retained intron
--TSL:2
Description

long intergenic non-protein coding RNA 1146 [Source:HGNC Symbol;Acc:HGNC:49467]

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
LINC01146-218ENST00000654646.11929No protein-
 
lncRNA
--Ensembl Canonical
LINC01146-261ENST00000665901.11983No protein-
 
lncRNA
--GENCODE basic
LINC01146-227ENST00000656485.11963No protein-
 
lncRNA
--GENCODE basic
LINC01146-275ENST00000670645.11928No protein-
 
lncRNA
---
LINC01146-270ENST00000669517.11752No protein-
 
lncRNA
--GENCODE basic
LINC01146-249ENST00000662577.11707No protein-
 
lncRNA
--GENCODE basic
LINC01146-221ENST00000655185.11685No protein-
 
lncRNA
--GENCODE basic
LINC01146-263ENST00000666809.11680No protein-
 
lncRNA
--GENCODE basic
LINC01146-225ENST00000656156.11667No protein-
 
lncRNA
--GENCODE basic
LINC01146-242ENST00000660504.11658No protein-
 
lncRNA
--GENCODE basic
LINC01146-211ENST00000653288.11639No protein-
 
lncRNA
---
LINC01146-246ENST00000661299.11595No protein-
 
lncRNA
--GENCODE basic
LINC01146-271ENST00000669569.11591No protein-
 
lncRNA
--GENCODE basic
LINC01146-279ENST00000671063.11535No protein-
 
lncRNA
---
LINC01146-243ENST00000660520.11526No protein-
 
lncRNA
---
LINC01146-276ENST00000670670.11516No protein-
 
lncRNA
---
LINC01146-262ENST00000666156.11497No protein-
 
lncRNA
--GENCODE basic
LINC01146-260ENST00000665065.11491No protein-
 
lncRNA
---
LINC01146-255ENST00000664331.11452No protein-
 
lncRNA
--GENCODE basic
LINC01146-229ENST00000657214.11444No protein-
 
lncRNA
---
LINC01146-222ENST00000655699.11441No protein-
 
lncRNA
---
LINC01146-238ENST00000659391.11437No protein-
 
lncRNA
---
LINC01146-257ENST00000664905.11379No protein-
 
lncRNA
---
LINC01146-265ENST00000667558.11362No protein-
 
lncRNA
---
LINC01146-269ENST00000669313.11308No protein-
 
lncRNA
---
LINC01146-220ENST00000655110.11293No protein-
 
lncRNA
---
LINC01146-223ENST00000656018.11274No protein-
 
lncRNA
---
LINC01146-228ENST00000656986.11270No protein-
 
lncRNA
--GENCODE basic
LINC01146-217ENST00000654510.11265No protein-
 
lncRNA
---
LINC01146-232ENST00000658614.11219No protein-
 
lncRNA
---
LINC01146-214ENST00000654022.11208No protein-
 
lncRNA
---
LINC01146-237ENST00000659330.11197No protein-
 
lncRNA
---
LINC01146-277ENST00000670733.11188No protein-
 
lncRNA
---
LINC01146-253ENST00000663527.11187No protein-
 
lncRNA
--GENCODE basic
LINC01146-205ENST00000556673.21182No protein-
 
lncRNA
--TSL:3
LINC01146-266ENST00000667759.11180No protein-
 
lncRNA
---
LINC01146-283ENST00000671585.11160No protein-
 
lncRNA
---
LINC01146-284ENST00000671685.11156No protein-
 
lncRNA
---
LINC01146-259ENST00000664976.11153No protein-
 
lncRNA
---
LINC01146-251ENST00000662785.11148No protein-
 
lncRNA
---
LINC01146-281ENST00000671198.11134No protein-
 
lncRNA
---
LINC01146-274ENST00000670474.11100No protein-
 
lncRNA
---
LINC01146-247ENST00000661820.11099No protein-
 
lncRNA
---
LINC01146-206ENST00000556684.61093No protein-
 
lncRNA
--TSL:3
LINC01146-272ENST00000669790.11083No protein-
 
lncRNA
---
LINC01146-230ENST00000658103.11082No protein-
 
lncRNA
---
LINC01146-231ENST00000658529.11076No protein-
 
lncRNA
---
LINC01146-245ENST00000660744.11067No protein-
 
lncRNA
---
LINC01146-240ENST00000660271.11056No protein-
 
lncRNA
---
LINC01146-280ENST00000671064.11053No protein-
 
lncRNA
---
LINC01146-210ENST00000653202.11050No protein-
 
lncRNA
---
LINC01146-226ENST00000656466.11047No protein-
 
lncRNA
---
LINC01146-212ENST00000653337.11045No protein-
 
lncRNA
---
LINC01146-268ENST00000668853.11024No protein-
 
lncRNA
---
LINC01146-216ENST00000654427.11006No protein-
 
lncRNA
---
LINC01146-244ENST00000660665.11003No protein-
 
lncRNA
---
LINC01146-215ENST00000654359.11001No protein-
 
lncRNA
---
LINC01146-254ENST00000664272.1985No protein-
 
lncRNA
---
LINC01146-256ENST00000664613.1975No protein-
 
lncRNA
---
LINC01146-203ENST00000555996.6975No protein-
 
lncRNA
--TSL:2
LINC01146-278ENST00000670811.1968No protein-
 
lncRNA
---
LINC01146-239ENST00000659555.1956No protein-
 
lncRNA
---
LINC01146-224ENST00000656043.1951No protein-
 
lncRNA
---
LINC01146-219ENST00000654831.1932No protein-
 
lncRNA
---
LINC01146-248ENST00000662304.1917No protein-
 
lncRNA
---
LINC01146-250ENST00000662720.1857No protein-
 
lncRNA
---
LINC01146-204ENST00000556033.5833No protein-
 
lncRNA
--TSL:1
LINC01146-236ENST00000659115.1832No protein-
 
lncRNA
---
LINC01146-235ENST00000658873.1827No protein-
 
lncRNA
---
LINC01146-209ENST00000653115.1818No protein-
 
lncRNA
---
LINC01146-234ENST00000658804.1816No protein-
 
lncRNA
---
LINC01146-213ENST00000653532.1812No protein-
 
lncRNA
---
LINC01146-241ENST00000660394.1797No protein-
 
lncRNA
---
LINC01146-258ENST00000664916.1794No protein-
 
lncRNA
---
LINC01146-233ENST00000658802.1781No protein-
 
lncRNA
---
LINC01146-252ENST00000663488.1734No protein-
 
lncRNA
---
LINC01146-267ENST00000668342.1665No protein-
 
lncRNA
---
LINC01146-282ENST00000671337.1605No protein-
 
lncRNA
---
LINC01146-264ENST00000667100.1588No protein-
 
lncRNA
---
LINC01146-273ENST00000670285.1571No protein-
 
lncRNA
---
LINC01146-208ENST00000557355.1548No protein-
 
lncRNA
--TSL:4
LINC01146-201ENST00000553496.1425No protein-
 
lncRNA
--TSL:3
LINC01146-202ENST00000553929.5413No protein-
 
lncRNA
--TSL:3
LINC01146-207ENST00000557339.5397No protein-
 
lncRNA
--TSL:3
Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,100 bps,

Version

ENST00000670474.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript-based displays

    HASH(0x247f2078)