Human (GRCh38.p14)
Description

LSM14A mRNA processing body assembly factor [Source:HGNC Symbol;Acc:HGNC:24489]

Gene Synonyms

C19ORF13, DKFZP434D1335, FAM61A, RAP55, RAP55A

Location
About this transcript

This transcript has 2 exons, is associated with 957 variant alleles and maps to 106 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000544216.8LSM14A-2033431463aaENSP00000446271.2
 
Protein coding
CCDS12435Q8ND56-2 NM_015578.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000433627.9LSM14A-2013424463aaENSP00000413964.3
 
Protein coding
CCDS46040Q8ND56-1 -GENCODE basicTSL:1
ENST00000540746.6LSM14A-2022152422aaENSP00000446451.1
 
Protein coding
CCDS92582Q8ND56-3 -GENCODE basicTSL:2
ENST00000586157.2LSM14A-205944314aaENSP00000466725.2
 
Protein coding
K7EMZ9 -TSL:5CDS 5' and 3' incomplete
ENST00000585887.3LSM14A-204445148aaENSP00000485334.1
 
Non stop decay
A0A096LP11 -TSL:2CDS 5' incomplete
ENST00000589878.5LSM14A-207559102aaENSP00000468130.1
 
Nonsense mediated decay
I3L4Q1 -TSL:4
ENST00000588582.3LSM14A-2063601No protein-
 
Retained intron
--TSL:2
ENST00000590416.1LSM14A-208699No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 2, Coding exons: 2, Transcript length: 445 bps, Translation length: 148 residues

Transcript Support Level (TSL)

TSL:2

Incomplete CDS

CDS 5' incomplete

Version

ENST00000585887.3

Type

Non stop decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.