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Description

heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]

Gene Synonyms

ALS20, HNRPA1, hnRNP-A1

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000340913.11HNRNPA1-2023744372aaENSP00000341826.7
 
Protein coding
CCDS44909P09651-1 NM_031157.4MANE Select v0.95Ensembl CanonicalGENCODE basicTSL:1
ENST00000546500.5HNRNPA1-2034121320aaENSP00000448617.1
 
Protein coding
CCDS41793P09651-2 -GENCODE basicAPPRIS P2TSL:1
ENST00000677210.1HNRNPA1-2312793372aaENSP00000503610.1
 
Protein coding
CCDS44909P09651-1 -GENCODE basic
ENST00000550482.2HNRNPA1-2092596320aaENSP00000446486.2
 
Protein coding
CCDS41793P09651-2 -GENCODE basicAPPRIS P2TSL:2
ENST00000677385.1HNRNPA1-2383999242aaENSP00000502985.1
 
Protein coding
-A0A7I2V2L6 -GENCODE basic
ENST00000677249.1HNRNPA1-2342278319aaENSP00000503649.1
 
Protein coding
-A0A7I2V3R8 -GENCODE basicAPPRIS ALT1
ENST00000678077.1HNRNPA1-2502067275aaENSP00000504814.1
 
Protein coding
-A0A7I2YQX9 -GENCODE basic
ENST00000677375.1HNRNPA1-2371811326aaENSP00000503651.1
 
Protein coding
-A0A7I2V3W0 -GENCODE basic
ENST00000547276.5HNRNPA1-2041539267aaENSP00000447260.1
 
Protein coding
-P09651-3 -GENCODE basicTSL:1
ENST00000330752.12HNRNPA1-2011294307aaENSP00000333504.8
 
Protein coding
-F8W6I7 -GENCODE basicTSL:5
ENST00000548688.5HNRNPA1-208711231aaENSP00000447782.1
 
Protein coding
-F8VZ49 -TSL:3CDS 3' incomplete
ENST00000547708.5HNRNPA1-206530156aaENSP00000448229.1
 
Protein coding
-F8W646 -TSL:4CDS 3' incomplete
ENST00000551702.5HNRNPA1-213481145aaENSP00000448117.1
 
Protein coding
-F8VTQ5 -TSL:3CDS 3' incomplete
ENST00000679101.1HNRNPA1-27939448aaENSP00000503166.1
 
Protein coding
-A0A7I2V2Z4 -CDS 3' incomplete
ENST00000677840.1HNRNPA1-247362108aaENSP00000503273.1
 
Protein coding
-A0A7I2V360 -CDS 5' incomplete
ENST00000676951.1HNRNPA1-227312104aaENSP00000502981.1
 
Protein coding
-A0A7I2V2M7 -CDS 5' and 3' incomplete
ENST00000678611.1HNRNPA1-26629799aaENSP00000504004.1
 
Protein coding
-A0A7I2V4F8 -CDS 5' and 3' incomplete
ENST00000678970.1HNRNPA1-27529287aaENSP00000503825.1
 
Protein coding
-A0A7I2YQJ2 -CDS 5' incomplete
ENST00000676853.1HNRNPA1-22329197aaENSP00000503749.1
 
Protein coding
-A0A7I2V459 -CDS 5' and 3' incomplete
ENST00000678581.1HNRNPA1-26429197aaENSP00000504251.1
 
Protein coding
-A0A7I2V520 -CDS 5' and 3' incomplete
ENST00000678424.1HNRNPA1-26028896aaENSP00000503030.1
 
Protein coding
-A0A7I2V2Q7 -CDS 5' and 3' incomplete
ENST00000677778.1HNRNPA1-24528181aaENSP00000504642.1
 
Protein coding
-A0A7I2YQV6 -CDS 5' incomplete
ENST00000679079.1HNRNPA1-27827756aaENSP00000504545.1
 
Protein coding
-A0A7I2YQU4 -CDS 5' incomplete
ENST00000679026.1HNRNPA1-27627756aaENSP00000504539.1
 
Protein coding
-A0A7I2V5N7 -CDS 5' incomplete
ENST00000676794.1HNRNPA1-22126445aaENSP00000504819.1
 
Protein coding
-A0A7I2YQY2 -GENCODE basic
ENST00000678919.1HNRNPA1-27225475aaENSP00000504604.1
 
Protein coding
-A0A7I2V5U9 -CDS 3' incomplete
ENST00000677645.1HNRNPA1-24324983aaENSP00000504753.1
 
Protein coding
-A0A7I2V5T1 -CDS 5' and 3' incomplete
ENST00000677636.1HNRNPA1-24224983aaENSP00000503254.1
 
Protein coding
-A0A7I2V334 -CDS 5' and 3' incomplete
ENST00000678347.1HNRNPA1-25624983aaENSP00000504511.1
 
Protein coding
-A0A7I2V5L7 -CDS 5' and 3' incomplete
ENST00000678876.1HNRNPA1-27024983aaENSP00000503756.1
 
Protein coding
-A0A7I2V453 -CDS 5' and 3' incomplete
ENST00000677945.1HNRNPA1-24923478aaENSP00000503056.1
 
Protein coding
-A0A7I2V2R4 -CDS 5' and 3' incomplete
ENST00000678873.1HNRNPA1-26923177aaENSP00000503516.1
 
Protein coding
-A0A7I2V3K5 -CDS 5' and 3' incomplete
ENST00000679063.1HNRNPA1-27723177aaENSP00000504683.1
 
Protein coding
-A0A7I2V666 -CDS 5' and 3' incomplete
ENST00000678412.1HNRNPA1-25821670aaENSP00000503562.1
 
Protein coding
-A0A7I2V3S1 -CDS 5' incomplete
ENST00000678934.1HNRNPA1-27321070aaENSP00000504850.1
 
Protein coding
-A0A7I2V661 -CDS 5' and 3' incomplete
ENST00000676707.1HNRNPA1-21921070aaENSP00000504696.1
 
Protein coding
-A0A7I2V5P1 -CDS 5' and 3' incomplete
ENST00000677666.1HNRNPA1-24419618aaENSP00000504664.1
 
Protein coding
-A0A7I2YQW0 -CDS 5' incomplete
ENST00000676472.1HNRNPA1-21519565aaENSP00000503977.1
 
Protein coding
-A0A7I2V4E2 -CDS 5' and 3' incomplete
ENST00000678690.1HNRNPA1-26819054aaENSP00000503229.1
 
Protein coding
-A0A7I2V3C7 -CDS 3' incomplete
ENST00000678513.1HNRNPA1-26318361aaENSP00000503162.1
 
Protein coding
-A0A7I2V2X1 -CDS 5' and 3' incomplete
ENST00000678597.1HNRNPA1-26518060aaENSP00000504089.1
 
Protein coding
-A0A7I2V4P7 -CDS 5' and 3' incomplete
ENST00000677291.1HNRNPA1-23616856aaENSP00000504458.1
 
Protein coding
-A0A7I2V5H0 -CDS 5' and 3' incomplete
ENST00000677224.1HNRNPA1-23316555aaENSP00000502876.1
 
Protein coding
-A0A7I2V2F1 -CDS 5' and 3' incomplete
ENST00000677279.1HNRNPA1-23516254aaENSP00000503602.1
 
Protein coding
-A0A7I2V3U8 -CDS 5' and 3' incomplete
ENST00000676886.1HNRNPA1-22514446aaENSP00000503468.1
 
Protein coding
-A0A7I2V3J5 -CDS 5' incomplete
ENST00000678456.1HNRNPA1-26213543aaENSP00000504368.1
 
Protein coding
-A0A7I2YQR6 -CDS 5' incomplete
ENST00000677518.1HNRNPA1-24012642aaENSP00000503537.1
 
Protein coding
-A0A7I2V434 -CDS 5' and 3' incomplete
ENST00000677847.1HNRNPA1-2489632aaENSP00000503848.1
 
Protein coding
-A0A7I2V497 -CDS 5' and 3' incomplete
ENST00000678947.1HNRNPA1-2744214aaENSP00000503733.1
 
Protein coding
-A0A7I2V3U9 -CDS 5' and 3' incomplete
ENST00000677488.1HNRNPA1-2393612aaENSP00000504431.1
 
Protein coding
-A0A7I2V595 -CDS 5' and 3' incomplete
ENST00000547566.5HNRNPA1-2051234320aaENSP00000449913.1
 
Nonsense mediated decay
CCDS41793P09651-2 -TSL:1
ENST00000676842.1HNRNPA1-22248953aaENSP00000504036.1
 
Nonsense mediated decay
-A0A7I2V4M0 -CDS 5' incomplete
ENST00000677191.1HNRNPA1-23046367aaENSP00000503128.1
 
Nonsense mediated decay
-A0A7I2V2W8 -CDS 5' incomplete
ENST00000550994.2HNRNPA1-21045569aaENSP00000448917.2
 
Nonsense mediated decay
-F8VYN5 -TSL:4CDS 5' incomplete
ENST00000677539.1HNRNPA1-24144532aaENSP00000504506.1
 
Nonsense mediated decay
-A0A7I2V5W8 -CDS 5' incomplete
ENST00000676572.1HNRNPA1-21734932aaENSP00000503865.1
 
Nonsense mediated decay
-A0A7I2V5W8 -CDS 5' incomplete
ENST00000677220.1HNRNPA1-23233849aaENSP00000502987.1
 
Nonsense mediated decay
-A0A7I2YQ85 --
ENST00000679344.1HNRNPA1-28432428aaENSP00000504058.1
 
Nonsense mediated decay
-A0A7I2V4R7 -CDS 5' incomplete
ENST00000678448.1HNRNPA1-26131558aaENSP00000503619.1
 
Nonsense mediated decay
-A0A7I2V3W4 -CDS 5' incomplete
ENST00000678212.1HNRNPA1-25431131aaENSP00000503276.1
 
Nonsense mediated decay
-A0A7I2V3F4 -CDS 5' incomplete
ENST00000679273.1HNRNPA1-28230354aaENSP00000504626.1
 
Nonsense mediated decay
-A0A7I2YQV3 -CDS 5' incomplete
ENST00000678199.1HNRNPA1-25329318aaENSP00000504143.1
 
Nonsense mediated decay
-A0A7I2YQW0 -CDS 5' incomplete
ENST00000676661.1HNRNPA1-21827118aaENSP00000503829.1
 
Nonsense mediated decay
-A0A7I2YQW0 -CDS 5' incomplete
ENST00000676925.1HNRNPA1-22627018aaENSP00000504344.1
 
Nonsense mediated decay
-A0A7I2YQW0 -CDS 5' incomplete
ENST00000677072.1HNRNPA1-22926718aaENSP00000502915.1
 
Nonsense mediated decay
-A0A7I2YQW0 -CDS 5' incomplete
ENST00000677832.1HNRNPA1-24625918aaENSP00000503861.1
 
Nonsense mediated decay
-A0A7I2YQW0 -CDS 5' incomplete
ENST00000677061.1HNRNPA1-22824918aaENSP00000503520.1
 
Nonsense mediated decay
-A0A7I2YQW0 -CDS 5' incomplete
ENST00000679251.1HNRNPA1-28121518aaENSP00000502904.1
 
Nonsense mediated decay
-A0A7I2YQW0 -CDS 5' incomplete
ENST00000551803.1HNRNPA1-214372No protein-
 
Processed transcript
---TSL:3
ENST00000678103.1HNRNPA1-252242No protein-
 
Processed transcript
----
ENST00000678900.1HNRNPA1-271163No protein-
 
Processed transcript
----
ENST00000678279.1HNRNPA1-255142No protein-
 
Processed transcript
----
ENST00000678365.1HNRNPA1-257119No protein-
 
Processed transcript
----
ENST00000676855.1HNRNPA1-224111No protein-
 
Processed transcript
----
ENST00000679319.1HNRNPA1-283105No protein-
 
Processed transcript
----
ENST00000676528.1HNRNPA1-216105No protein-
 
Processed transcript
----
ENST00000678687.1HNRNPA1-267102No protein-
 
Processed transcript
----
ENST00000678093.1HNRNPA1-25189No protein-
 
Processed transcript
----
ENST00000679228.1HNRNPA1-2802515No protein-
 
Retained intron
----
ENST00000678418.1HNRNPA1-2592008No protein-
 
Retained intron
----
ENST00000676725.1HNRNPA1-2201987No protein-
 
Retained intron
----
ENST00000547870.2HNRNPA1-2071610No protein-
 
Retained intron
---TSL:3
ENST00000551665.1HNRNPA1-211925No protein-
 
Retained intron
---TSL:2
ENST00000551679.1HNRNPA1-212359No protein-
 
Retained intron
---TSL:2
Description

structural maintenance of chromosomes flexible hinge domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29090]

Gene Synonyms

FSHD2, KIAA0650

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000320876.11SMCHD1-20188332005aaENSP00000326603.7
 
Protein coding
CCDS45822A6NHR9-1 NM_015295.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P2TSL:5
ENST00000688342.1SMCHD1-22064881961aaENSP00000508422.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
ENST00000577880.5SMCHD1-20349511388aaENSP00000463049.1
 
Nonsense mediated decay
-J3KTL8 -TSL:2CDS 5' incomplete
ENST00000584897.5SMCHD1-2114143150aaENSP00000464684.1
 
Nonsense mediated decay
-J3QSH1 -TSL:2CDS 5' incomplete
ENST00000686763.1SMCHD1-2183793385aaENSP00000510263.1
 
Nonsense mediated decay
----
ENST00000686864.1SMCHD1-2193384748aaENSP00000509148.1
 
Nonsense mediated decay
---CDS 5' incomplete
ENST00000645355.1SMCHD1-2152315212aaENSP00000495392.1
 
Nonsense mediated decay
-A0A2R8YE92 -CDS 5' incomplete
ENST00000642953.1SMCHD1-2141263308aaENSP00000493989.1
 
Nonsense mediated decay
-A0A2R8YCU7 -CDS 5' incomplete
ENST00000585229.1SMCHD1-21255549aaENSP00000462050.1
 
Nonsense mediated decay
-J3KRK8 -TSL:4CDS 5' incomplete
ENST00000690757.1SMCHD1-2252084No protein-
 
Processed transcript
----
ENST00000583800.1SMCHD1-210865No protein-
 
Processed transcript
---TSL:5
ENST00000609587.1SMCHD1-213460No protein-
 
Processed transcript
---TSL:NA
ENST00000693213.1SMCHD1-2266737No protein-
 
Retained intron
----
ENST00000688708.1SMCHD1-2215410No protein-
 
Retained intron
----
ENST00000689034.1SMCHD1-2234628No protein-
 
Retained intron
----
ENST00000583441.2SMCHD1-2094228No protein-
 
Retained intron
---TSL:5
ENST00000684915.1SMCHD1-2163534No protein-
 
Retained intron
----
ENST00000688964.1SMCHD1-2223190No protein-
 
Retained intron
----
ENST00000693522.1SMCHD1-2273151No protein-
 
Retained intron
----
ENST00000685656.1SMCHD1-2172988No protein-
 
Retained intron
----
ENST00000689800.1SMCHD1-2242798No protein-
 
Retained intron
----
ENST00000583344.2SMCHD1-2081124No protein-
 
Retained intron
---TSL:2
ENST00000581383.1SMCHD1-205806No protein-
 
Retained intron
---TSL:3
ENST00000581631.1SMCHD1-206729No protein-
 
Retained intron
---TSL:3
ENST00000581711.1SMCHD1-207546No protein-
 
Retained intron
---TSL:4
ENST00000577300.1SMCHD1-202506No protein-
 
Retained intron
---TSL:3
ENST00000581226.1SMCHD1-204459No protein-
 
Retained intron
---TSL:3
Description

CF transmembrane conductance regulator [Source:HGNC Symbol;Acc:HGNC:1884]

Gene Synonyms

ABC35, ABCC7, CF, CFTR/MRP, MRP7, TNR-CFTR, dJ760C5.1

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000003084.11CFTR-20160701480aaENSP00000003084.6
 
Protein coding
CCDS5773P13569-1 NM_000492.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000426809.5CFTR-20243161438aaENSP00000389119.1
 
Protein coding
-E7EPB6 -TSL:5CDS 3' incomplete
ENST00000649781.1CFTR-21842601419aaENSP00000497203.1
 
Protein coding
-P13569-2 -GENCODE basic
ENST00000649406.1CFTR-21737581187aaENSP00000497965.1
 
Protein coding
-A0A3B3ITW5 -GENCODE basic
ENST00000689011.1CFTR-2232842280aaENSP00000510587.1
 
Protein coding
---CDS 5' incomplete
ENST00000648260.1CFTR-2162723842aaENSP00000497957.1
 
Protein coding
-A0A3B3ITW0 -GENCODE basic
ENST00000673785.1CFTR-2201706333aaENSP00000501235.1
 
Protein coding
-A0A669KBE8 -CDS 3' incomplete
ENST00000446805.2CFTR-20569036aaENSP00000417012.1
 
Protein coding
-C9J6L5 -TSL:4CDS 3' incomplete
ENST00000468795.1CFTR-206682190aaENSP00000419254.1
 
Protein coding
-H0Y8A9 -TSL:5CDS 5' incomplete
ENST00000600166.1CFTR-209559156aaENSP00000470177.1
 
Protein coding
-M0QYZ3 -TSL:5CDS 5' incomplete
ENST00000647720.1CFTR-2143347413aaENSP00000497673.1
 
Nonsense mediated decay
-A0A3B3ITE0 -CDS 5' incomplete
ENST00000685018.1CFTR-2212864216aaENSP00000510194.1
 
Nonsense mediated decay
----
ENST00000647978.1CFTR-215252458aaENSP00000497658.1
 
Nonsense mediated decay
-A0A3B3IT97 --
ENST00000687278.1CFTR-2222372377aaENSP00000509593.1
 
Nonsense mediated decay
----
ENST00000692802.1CFTR-2241465No protein-
 
Processed transcript
----
ENST00000608965.5CFTR-210896No protein-
 
Processed transcript
---TSL:5
ENST00000647639.1CFTR-213608No protein-
 
Processed transcript
----
ENST00000610149.1CFTR-211519No protein-
 
Processed transcript
---TSL:5
ENST00000429014.1CFTR-203423No protein-
 
Processed transcript
---TSL:5
ENST00000693465.1CFTR-225379No protein-
 
Processed transcript
----
ENST00000436097.1CFTR-204349No protein-
 
Processed transcript
---TSL:2
ENST00000693480.1CFTR-226299No protein-
 
Processed transcript
----
ENST00000546407.1CFTR-208222No protein-
 
Processed transcript
---TSL:1
ENST00000472848.1CFTR-207148No protein-
 
Processed transcript
---TSL:5
ENST00000649850.1CFTR-219931No protein-
 
Retained intron
----
ENST00000621535.1CFTR-212657No protein-
 
Retained intron
---TSL:5
Description

Pvt1 oncogene [Source:HGNC Symbol;Acc:HGNC:9709]

Gene Synonyms

LINC00079, MIR1204HG, NCRNA00079, onco-lncRNA-100

Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000651587.1PVT1-2242444No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
ENST00000660438.1PVT1-2932450No protein-
 
lncRNA
--GENCODE basic
ENST00000523068.2PVT1-2162255No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000664995.1PVT1-3232230No protein-
 
lncRNA
--GENCODE basic
ENST00000659106.1PVT1-2832187No protein-
 
lncRNA
---
ENST00000660631.1PVT1-2952161No protein-
 
lncRNA
---
ENST00000657449.1PVT1-2652149No protein-
 
lncRNA
--GENCODE basic
ENST00000667418.1PVT1-3472143No protein-
 
lncRNA
--GENCODE basic
ENST00000666147.1PVT1-3362097No protein-
 
lncRNA
---
ENST00000656693.1PVT1-2541990No protein-
 
lncRNA
--GENCODE basic
ENST00000668098.1PVT1-3511985No protein-
 
lncRNA
---
ENST00000665856.1PVT1-3311965No protein-
 
lncRNA
--GENCODE basic
ENST00000656532.1PVT1-2531909No protein-
 
lncRNA
---
ENST00000670532.1PVT1-3681840No protein-
 
lncRNA
--GENCODE basic
ENST00000660456.1PVT1-2941814No protein-
 
lncRNA
---
ENST00000670714.1PVT1-3721756No protein-
 
lncRNA
---
ENST00000659912.1PVT1-2881744No protein-
 
lncRNA
---
ENST00000658840.1PVT1-2821738No protein-
 
lncRNA
--GENCODE basic
ENST00000662413.1PVT1-3081727No protein-
 
lncRNA
---
ENST00000664265.1PVT1-3171720No protein-
 
lncRNA
--GENCODE basic
ENST00000659326.1PVT1-2841706No protein-
 
lncRNA
--GENCODE basic
ENST00000667305.1PVT1-3461701No protein-
 
lncRNA
---
ENST00000513868.6PVT1-2031699No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000657356.1PVT1-2631697No protein-
 
lncRNA
--GENCODE basic
ENST00000668619.1PVT1-3571685No protein-
 
lncRNA
---
ENST00000662410.1PVT1-3071668No protein-
 
lncRNA
---
ENST00000667630.1PVT1-3491634No protein-
 
lncRNA
---
ENST00000666776.1PVT1-3401628No protein-
 
lncRNA
--GENCODE basic
ENST00000522963.6PVT1-2151619No protein-
 
lncRNA
--GENCODE basicTSL:4
ENST00000652816.1PVT1-2291610No protein-
 
lncRNA
---
ENST00000670204.1PVT1-3661600No protein-
 
lncRNA
--GENCODE basic
ENST00000656402.1PVT1-2501585No protein-
 
lncRNA
---
ENST00000657289.1PVT1-2611581No protein-
 
lncRNA
---
ENST00000661988.1PVT1-3051580No protein-
 
lncRNA
---
ENST00000521122.2PVT1-2101578No protein-
 
lncRNA
--GENCODE basicTSL:3
ENST00000666777.1PVT1-3411555No protein-
 
lncRNA
---
ENST00000661160.1PVT1-3001546No protein-
 
lncRNA
---
ENST00000521951.1PVT1-2121535No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000659666.1PVT1-2861533No protein-
 
lncRNA
--GENCODE basic
ENST00000661625.1PVT1-3031519No protein-
 
lncRNA
--GENCODE basic
ENST00000669416.1PVT1-3621516No protein-
 
lncRNA
---
ENST00000517790.2PVT1-2051513No protein-
 
lncRNA
--TSL:2
ENST00000657112.1PVT1-2581499No protein-
 
lncRNA
---
ENST00000661830.1PVT1-3041490No protein-
 
lncRNA
---
ENST00000653853.1PVT1-2371490No protein-
 
lncRNA
---
ENST00000669951.1PVT1-3641485No protein-
 
lncRNA
---
ENST00000654369.1PVT1-2421482No protein-
 
lncRNA
---
ENST00000666080.1PVT1-3341481No protein-
 
lncRNA
---
ENST00000663461.1PVT1-3121471No protein-
 
lncRNA
---
ENST00000523190.7PVT1-2171466No protein-
 
lncRNA
--TSL:3
ENST00000667149.1PVT1-3441463No protein-
 
lncRNA
---
ENST00000654105.1PVT1-2401460No protein-
 
lncRNA
---
ENST00000657596.1PVT1-2681455No protein-
 
lncRNA
---
ENST00000657451.1PVT1-2661454No protein-
 
lncRNA
---
ENST00000661205.1PVT1-3011449No protein-
 
lncRNA
---
ENST00000668123.1PVT1-3521433No protein-
 
lncRNA
---
ENST00000669272.1PVT1-3601417No protein-
 
lncRNA
---
ENST00000654324.1PVT1-2411411No protein-
 
lncRNA
---
ENST00000665737.1PVT1-3301410No protein-
 
lncRNA
---
ENST00000658350.1PVT1-2791402No protein-
 
lncRNA
---
ENST00000664299.1PVT1-3191396No protein-
 
lncRNA
---
ENST00000671092.1PVT1-3751393No protein-
 
lncRNA
---
ENST00000657667.1PVT1-2691378No protein-
 
lncRNA
---
ENST00000659625.1PVT1-2851363No protein-
 
lncRNA
---
ENST00000657211.1PVT1-2601353No protein-
 
lncRNA
---
ENST00000670795.1PVT1-3731348No protein-
 
lncRNA
---
ENST00000663059.1PVT1-3111330No protein-
 
lncRNA
---
ENST00000653990.1PVT1-2381329No protein-
 
lncRNA
---
ENST00000670223.1PVT1-3671321No protein-
 
lncRNA
---
ENST00000656999.1PVT1-2571314No protein-
 
lncRNA
---
ENST00000666353.1PVT1-3381312No protein-
 
lncRNA
---
ENST00000654091.1PVT1-2391311No protein-
 
lncRNA
---
ENST00000656411.1PVT1-2511281No protein-
 
lncRNA
---
ENST00000669082.1PVT1-3581280No protein-
 
lncRNA
---
ENST00000653497.1PVT1-2331278No protein-
 
lncRNA
---
ENST00000653522.1PVT1-2341275No protein-
 
lncRNA
---
ENST00000667714.1PVT1-3501269No protein-
 
lncRNA
---
ENST00000653845.1PVT1-2361262No protein-
 
lncRNA
---
ENST00000685634.1PVT1-3781256No protein-
 
lncRNA
---
ENST00000657517.1PVT1-2671253No protein-
 
lncRNA
---
ENST00000664293.1PVT1-3181206No protein-
 
lncRNA
---
ENST00000663753.1PVT1-3141206No protein-
 
lncRNA
---
ENST00000664742.1PVT1-3211200No protein-
 
lncRNA
---
ENST00000660122.1PVT1-2901199No protein-
 
lncRNA
---
ENST00000517525.2PVT1-2041194No protein-
 
lncRNA
--TSL:3
ENST00000671088.1PVT1-3741191No protein-
 
lncRNA
---
ENST00000657183.1PVT1-2591172No protein-
 
lncRNA
--GENCODE basic
ENST00000656491.1PVT1-2521167No protein-
 
lncRNA
---
ENST00000658556.1PVT1-2811163No protein-
 
lncRNA
---
ENST00000692433.1PVT1-3821163No protein-
 
lncRNA
---
ENST00000665721.1PVT1-3291162No protein-
 
lncRNA
---
ENST00000669132.1PVT1-3591156No protein-
 
lncRNA
---
ENST00000662766.1PVT1-3101152No protein-
 
lncRNA
---
ENST00000660200.1PVT1-2921139No protein-
 
lncRNA
--GENCODE basic
ENST00000662061.1PVT1-3061139No protein-
 
lncRNA
---
ENST00000522414.2PVT1-2131132No protein-
 
lncRNA
--TSL:2
ENST00000660896.1PVT1-2981128No protein-
 
lncRNA
---
ENST00000652695.1PVT1-2271126No protein-
 
lncRNA
---
ENST00000670602.1PVT1-3701124No protein-
 
lncRNA
---
ENST00000655783.1PVT1-2461118No protein-
 
lncRNA
---
ENST00000524165.6PVT1-2201114No protein-
 
lncRNA
--TSL:2
ENST00000664610.1PVT1-3201114No protein-
 
lncRNA
---
ENST00000670626.1PVT1-3711114No protein-
 
lncRNA
---
ENST00000512617.7PVT1-2021109No protein-
 
lncRNA
--TSL:3
ENST00000656077.1PVT1-2471109No protein-
 
lncRNA
--GENCODE basic
ENST00000665246.1PVT1-3261096No protein-
 
lncRNA
---
ENST00000668479.1PVT1-3551091No protein-
 
lncRNA
---
ENST00000657384.1PVT1-2641068No protein-
 
lncRNA
---
ENST00000669509.1PVT1-3631066No protein-
 
lncRNA
---
ENST00000666076.1PVT1-3331062No protein-
 
lncRNA
---
ENST00000523328.6PVT1-2181047No protein-
 
lncRNA
--TSL:1
ENST00000667539.1PVT1-3481041No protein-
 
lncRNA
---
ENST00000664139.1PVT1-3151036No protein-
 
lncRNA
---
ENST00000650846.1PVT1-2211020No protein-
 
lncRNA
---
ENST00000666842.1PVT1-3421019No protein-
 
lncRNA
---
ENST00000652492.1PVT1-2261017No protein-
 
lncRNA
--GENCODE basic
ENST00000656880.1PVT1-2551017No protein-
 
lncRNA
---
ENST00000504719.7PVT1-2011017No protein-
 
lncRNA
--TSL:2
ENST00000519481.6PVT1-2081010No protein-
 
lncRNA
--TSL:2
ENST00000685606.1PVT1-3771004No protein-
 
lncRNA
---
ENST00000666452.1PVT1-3391001No protein-
 
lncRNA
---
ENST00000665698.1PVT1-3281000No protein-
 
lncRNA
---
ENST00000518528.2PVT1-207995No protein-
 
lncRNA
--TSL:3
ENST00000655594.1PVT1-245978No protein-
 
lncRNA
---
ENST00000657693.1PVT1-271977No protein-
 
lncRNA
---
ENST00000651568.1PVT1-223971No protein-
 
lncRNA
--GENCODE basic
ENST00000665166.1PVT1-324965No protein-
 
lncRNA
---
ENST00000665175.1PVT1-325964No protein-
 
lncRNA
---
ENST00000666223.1PVT1-337963No protein-
 
lncRNA
---
ENST00000668480.1PVT1-356956No protein-
 
lncRNA
---
ENST00000656396.1PVT1-249938No protein-
 
lncRNA
---
ENST00000656168.1PVT1-248935No protein-
 
lncRNA
--GENCODE basic
ENST00000661391.1PVT1-302924No protein-
 
lncRNA
---
ENST00000522875.5PVT1-214922No protein-
 
lncRNA
--TSL:5
ENST00000690350.1PVT1-380922No protein-
 
lncRNA
---
ENST00000651664.1PVT1-225914No protein-
 
lncRNA
---
ENST00000658158.1PVT1-276909No protein-
 
lncRNA
--GENCODE basic
ENST00000657297.1PVT1-262907No protein-
 
lncRNA
---
ENST00000653608.1PVT1-235906No protein-
 
lncRNA
---
ENST00000656948.1PVT1-256904No protein-
 
lncRNA
---
ENST00000667204.1PVT1-345897No protein-
 
lncRNA
---
ENST00000690788.1PVT1-381891No protein-
 
lncRNA
---
ENST00000669407.1PVT1-361890No protein-
 
lncRNA
---
ENST00000664924.1PVT1-322886No protein-
 
lncRNA
---
ENST00000670535.1PVT1-369876No protein-
 
lncRNA
---
ENST00000660069.1PVT1-289870No protein-
 
lncRNA
---
ENST00000652993.1PVT1-231866No protein-
 
lncRNA
---
ENST00000664214.1PVT1-316861No protein-
 
lncRNA
---
ENST00000662709.1PVT1-309858No protein-
 
lncRNA
---
ENST00000655099.1PVT1-243855No protein-
 
lncRNA
---
ENST00000660781.1PVT1-297854No protein-
 
lncRNA
---
ENST00000692980.1PVT1-383851No protein-
 
lncRNA
---
ENST00000523427.2PVT1-219837No protein-
 
lncRNA
--TSL:3
ENST00000520913.2PVT1-209835No protein-
 
lncRNA
--TSL:2
ENST00000666878.1PVT1-343830No protein-
 
lncRNA
---
ENST00000652883.1PVT1-230821No protein-
 
lncRNA
---
ENST00000517838.6PVT1-206821No protein-
 
lncRNA
--TSL:2
ENST00000658018.1PVT1-274820No protein-
 
lncRNA
---
ENST00000652728.1PVT1-228812No protein-
 
lncRNA
---
ENST00000671587.1PVT1-376803No protein-
 
lncRNA
---
ENST00000659892.1PVT1-287782No protein-
 
lncRNA
---
ENST00000650930.1PVT1-222777No protein-
 
lncRNA
---
ENST00000660146.1PVT1-291764No protein-
 
lncRNA
---
ENST00000665372.1PVT1-327762No protein-
 
lncRNA
---
ENST00000658429.1PVT1-280760No protein-
 
lncRNA
---
ENST00000668351.1PVT1-354759No protein-
 
lncRNA
---
ENST00000660912.1PVT1-299754No protein-
 
lncRNA
---
ENST00000658065.1PVT1-275745No protein-
 
lncRNA
---
ENST00000655148.1PVT1-244724No protein-
 
lncRNA
---
ENST00000657945.1PVT1-273678No protein-
 
lncRNA
---
ENST00000660659.1PVT1-296673No protein-
 
lncRNA
---
ENST00000658305.1PVT1-278641No protein-
 
lncRNA
---
ENST00000653406.1PVT1-232619No protein-
 
lncRNA
---
ENST00000663715.1PVT1-313615No protein-
 
lncRNA
---
ENST00000657682.1PVT1-270611No protein-
 
lncRNA
---
ENST00000657844.1PVT1-272609No protein-
 
lncRNA
---
ENST00000666105.1PVT1-335608No protein-
 
lncRNA
---
ENST00000668215.1PVT1-353590No protein-
 
lncRNA
---
ENST00000689722.1PVT1-379573No protein-
 
lncRNA
---
ENST00000666039.1PVT1-332520No protein-
 
lncRNA
---
ENST00000670009.1PVT1-365456No protein-
 
lncRNA
---
ENST00000658242.1PVT1-277432No protein-
 
lncRNA
---
ENST00000521600.5PVT1-211408No protein-
 
lncRNA
--TSL:2
Description

cancer susceptibility 19 [Source:HGNC Symbol;Acc:HGNC:49476]

Gene Synonyms

CARLo-6, LINC01245

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000641965.1CASC19-2702329No protein-
 
Retained intron
---
ENST00000641584.1CASC19-2422114No protein-
 
Retained intron
---
ENST00000642088.1CASC19-2782091No protein-
 
Retained intron
---
ENST00000641392.2CASC19-2261855No protein-
 
Retained intron
---
ENST00000642082.1CASC19-2771545No protein-
 
Retained intron
---
ENST00000641582.1CASC19-2411421No protein-
 
Retained intron
---
ENST00000641510.1CASC19-2361384No protein-
 
Retained intron
---
ENST00000641919.1CASC19-2651172No protein-
 
Retained intron
---
ENST00000641514.1CASC19-2371074No protein-
 
Retained intron
---
ENST00000641073.1CASC19-2101065No protein-
 
Retained intron
---
ENST00000641262.1CASC19-219832No protein-
 
Retained intron
---
ENST00000521815.2CASC19-202561No protein-
 
Retained intron
--TSL:3
ENST00000642100.1CASC19-279656No protein-
 
lncRNA
--Ensembl Canonical
ENST00000500112.2CASC19-2015735No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000641365.1CASC19-2252219No protein-
 
lncRNA
---
ENST00000641701.1CASC19-2512204No protein-
 
lncRNA
---
ENST00000641001.1CASC19-2042055No protein-
 
lncRNA
--GENCODE basic
ENST00000641828.1CASC19-2602001No protein-
 
lncRNA
--GENCODE basic
ENST00000642142.1CASC19-2841868No protein-
 
lncRNA
--GENCODE basic
ENST00000641414.2CASC19-2281701No protein-
 
lncRNA
--GENCODE basic
ENST00000641853.1CASC19-2611638No protein-
 
lncRNA
--GENCODE basic
ENST00000641625.1CASC19-2461606No protein-
 
lncRNA
--GENCODE basic
ENST00000641523.2CASC19-2381601No protein-
 
lncRNA
--GENCODE basic
ENST00000642118.2CASC19-2811559No protein-
 
lncRNA
--GENCODE basic
ENST00000641588.1CASC19-2431546No protein-
 
lncRNA
--GENCODE basic
ENST00000641421.1CASC19-2301530No protein-
 
lncRNA
--GENCODE basic
ENST00000641218.2CASC19-2181525No protein-
 
lncRNA
--GENCODE basic
ENST00000641171.1CASC19-2141493No protein-
 
lncRNA
---
ENST00000642018.2CASC19-2741477No protein-
 
lncRNA
--GENCODE basic
ENST00000641719.1CASC19-2541443No protein-
 
lncRNA
---
ENST00000664744.1CASC19-2871431No protein-
 
lncRNA
--GENCODE basic
ENST00000641028.1CASC19-2061430No protein-
 
lncRNA
---
ENST00000641964.1CASC19-2691415No protein-
 
lncRNA
---
ENST00000641013.1CASC19-2051411No protein-
 
lncRNA
--GENCODE basic
ENST00000641309.2CASC19-2211405No protein-
 
lncRNA
--GENCODE basic
ENST00000641880.1CASC19-2631404No protein-
 
lncRNA
---
ENST00000641733.1CASC19-2551385No protein-
 
lncRNA
---
ENST00000641418.1CASC19-2291373No protein-
 
lncRNA
--GENCODE basic
ENST00000641674.2CASC19-2481365No protein-
 
lncRNA
---
ENST00000641991.1CASC19-2721360No protein-
 
lncRNA
---
ENST00000642102.1CASC19-2801351No protein-
 
lncRNA
--GENCODE basic
ENST00000641704.2CASC19-2521336No protein-
 
lncRNA
---
ENST00000641056.1CASC19-2081292No protein-
 
lncRNA
--GENCODE basic
ENST00000641153.2CASC19-2121290No protein-
 
lncRNA
--GENCODE basic
ENST00000641411.1CASC19-2271285No protein-
 
lncRNA
--GENCODE basic
ENST00000641604.1CASC19-2441251No protein-
 
lncRNA
--GENCODE basic
ENST00000641480.1CASC19-2321244No protein-
 
lncRNA
--GENCODE basic
ENST00000641106.2CASC19-2111207No protein-
 
lncRNA
---
ENST00000642126.1CASC19-2821206No protein-
 
lncRNA
--GENCODE basic
ENST00000641912.1CASC19-2641184No protein-
 
lncRNA
--GENCODE basic
ENST00000641321.1CASC19-2221173No protein-
 
lncRNA
--GENCODE basic
ENST00000641488.2CASC19-2341160No protein-
 
lncRNA
---
ENST00000641425.1CASC19-2311156No protein-
 
lncRNA
---
ENST00000641496.1CASC19-2351154No protein-
 
lncRNA
--GENCODE basic
ENST00000641362.1CASC19-2241146No protein-
 
lncRNA
---
ENST00000641179.1CASC19-2161140No protein-
 
lncRNA
---
ENST00000657669.1CASC19-2851127No protein-
 
lncRNA
--GENCODE basic
ENST00000641944.1CASC19-2671117No protein-
 
lncRNA
---
ENST00000641642.1CASC19-2471107No protein-
 
lncRNA
---
ENST00000641162.1CASC19-2131091No protein-
 
lncRNA
---
ENST00000641357.1CASC19-2231069No protein-
 
lncRNA
---
ENST00000641578.1CASC19-2401061No protein-
 
lncRNA
---
ENST00000641934.1CASC19-2661050No protein-
 
lncRNA
---
ENST00000641029.1CASC19-2071047No protein-
 
lncRNA
---
ENST00000642077.1CASC19-276993No protein-
 
lncRNA
---
ENST00000641298.1CASC19-220974No protein-
 
lncRNA
---
ENST00000641487.1CASC19-233966No protein-
 
lncRNA
---
ENST00000641746.2CASC19-256960No protein-
 
lncRNA
---
ENST00000641174.1CASC19-215959No protein-
 
lncRNA
---
ENST00000642010.1CASC19-273925No protein-
 
lncRNA
---
ENST00000641547.1CASC19-239915No protein-
 
lncRNA
---
ENST00000641696.1CASC19-250886No protein-
 
lncRNA
---
ENST00000641187.1CASC19-217875No protein-
 
lncRNA
---
ENST00000641681.1CASC19-249871No protein-
 
lncRNA
---
ENST00000642134.1CASC19-283870No protein-
 
lncRNA
---
ENST00000641867.1CASC19-262866No protein-
 
lncRNA
---
ENST00000663628.1CASC19-286863No protein-
 
lncRNA
---
ENST00000641794.1CASC19-258857No protein-
 
lncRNA
---
ENST00000641968.1CASC19-271842No protein-
 
lncRNA
---
ENST00000641706.1CASC19-253818No protein-
 
lncRNA
---
ENST00000641786.1CASC19-257816No protein-
 
lncRNA
--GENCODE basic
ENST00000641615.1CASC19-245770No protein-
 
lncRNA
---
ENST00000641060.1CASC19-209679No protein-
 
lncRNA
---
ENST00000523510.1CASC19-203575No protein-
 
lncRNA
--GENCODE basicTSL:3
ENST00000641953.1CASC19-268571No protein-
 
lncRNA
---
ENST00000641825.1CASC19-259356No protein-
 
lncRNA
---
ENST00000642076.1CASC19-275165No protein-
 
lncRNA
---
Description

intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]

Gene Synonyms

ITSN, MGC134948, MGC134949, SH3D1A, SH3P17

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000381318.8ITSN1-206169721721aaENSP00000370719.3
 
Protein coding
CCDS33545Q15811-1 NM_003024.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000399367.7ITSN1-21257221716aaENSP00000382301.3
 
Protein coding
CCDS82664Q15811-8 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000381291.8ITSN1-20554371220aaENSP00000370691.4
 
Protein coding
CCDS33546Q15811-2 -GENCODE basicTSL:1
ENST00000399352.5ITSN1-20954081215aaENSP00000382289.1
 
Protein coding
CCDS82663Q15811-7 -GENCODE basicTSL:1
ENST00000399349.5ITSN1-20851911144aaENSP00000382286.1
 
Protein coding
CCDS82665Q15811-3 -GENCODE basicTSL:1
ENST00000399355.6ITSN1-21140031149aaENSP00000382292.2
 
Protein coding
CCDS82661F8W7U0 -GENCODE basicTSL:1
ENST00000399353.5ITSN1-21039131178aaENSP00000382290.1
 
Protein coding
CCDS82666Q15811-10 -GENCODE basicTSL:1
ENST00000381285.8ITSN1-2046107877aaENSP00000370685.5
 
Protein coding
-A8CTZ0 -GENCODE basicTSL:5
ENST00000399338.8ITSN1-20731151020aaENSP00000382275.4
 
Protein coding
-Q15811-5 -GENCODE basicTSL:1
ENST00000379960.9ITSN1-2013026237aaENSP00000369294.6
 
Protein coding
-D6PAW0 -GENCODE basicTSL:1
ENST00000381283.7ITSN1-2021116361aaENSP00000370683.3
 
Protein coding
-C9JQZ7 -TSL:5CDS 3' incomplete
ENST00000381284.7ITSN1-203949317aaENSP00000370684.3
 
Protein coding
-H0Y3G5 -TSL:1CDS 5' and 3' incomplete
ENST00000440794.2ITSN1-218936260aaENSP00000396054.1
 
Protein coding
-H0Y523 -TSL:5CDS 5' incomplete
ENST00000444491.5ITSN1-219827115aaENSP00000400079.1
 
Protein coding
-C9J1A4 -TSL:4CDS 3' incomplete
ENST00000415023.1ITSN1-213519173aaENSP00000409800.1
 
Protein coding
-Q6J334 -TSL:1CDS 5' and 3' incomplete
ENST00000451686.5ITSN1-22050178aaENSP00000407132.1
 
Protein coding
-C9JXS9 -TSL:4CDS 3' incomplete
ENST00000456489.1ITSN1-22148560aaENSP00000411464.1
 
Protein coding
-H7C3F1 -TSL:2CDS 5' incomplete
ENST00000419241.1ITSN1-21477977aaENSP00000415302.1
 
Nonsense mediated decay
-H7C429 -TSL:5CDS 5' incomplete
ENST00000437126.5ITSN1-21751477aaENSP00000413290.1
 
Nonsense mediated decay
-H0Y7J7 -TSL:5CDS 5' incomplete
ENST00000420666.1ITSN1-21542266aaENSP00000408319.1
 
Nonsense mediated decay
-H0Y6W3 -TSL:5CDS 5' incomplete
ENST00000488166.1ITSN1-230986No protein-
 
Processed transcript
---TSL:3
ENST00000479424.5ITSN1-228647No protein-
 
Processed transcript
---TSL:1
ENST00000495656.5ITSN1-232535No protein-
 
Processed transcript
---TSL:1
ENST00000472548.5ITSN1-225529No protein-
 
Processed transcript
---TSL:1
ENST00000470742.5ITSN1-224474No protein-
 
Processed transcript
---TSL:4
ENST00000428240.1ITSN1-216213No protein-
 
Processed transcript
---TSL:1
ENST00000489261.1ITSN1-2311108No protein-
 
Retained intron
---TSL:1
ENST00000462212.5ITSN1-2221102No protein-
 
Retained intron
---TSL:1
ENST00000487427.5ITSN1-229805No protein-
 
Retained intron
---TSL:1
ENST00000475422.5ITSN1-227798No protein-
 
Retained intron
---TSL:1
ENST00000474132.1ITSN1-226628No protein-
 
Retained intron
---TSL:3
ENST00000465143.1ITSN1-223614No protein-
 
Retained intron
---TSL:3
Description

THADA armadillo repeat containing [Source:HGNC Symbol;Acc:HGNC:19217]

Gene Synonyms

ARMC13, FLJ21877, GITA, KIAA1767

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000405975.7THADA-20760911953aaENSP00000386088.2
 
Protein coding
CCDS46268Q6YHU6-1 NM_022065.5MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000405006.8THADA-20663101953aaENSP00000385995.4
 
Protein coding
CCDS46268Q6YHU6-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000404790.5THADA-2053043894aaENSP00000384266.1
 
Protein coding
CCDS62901Q6YHU6-6 -GENCODE basicTSL:1
ENST00000402360.6THADA-2022974937aaENSP00000385441.2
 
Protein coding
CCDS62902Q6YHU6-5 -GENCODE basicTSL:5
ENST00000403856.1THADA-2046939870aaENSP00000385469.1
 
Protein coding
-B5MC89 -GENCODE basicTSL:1
ENST00000407351.5THADA-20836781193aaENSP00000386112.1
 
Protein coding
-H0Y3V5 -TSL:2CDS 5' incomplete
ENST00000398653.5THADA-2015900297aaENSP00000381647.1
 
Nonsense mediated decay
-B6ZDE5 -TSL:2
ENST00000408045.7THADA-2095585297aaENSP00000384172.2
 
Nonsense mediated decay
-B6ZDE5 -TSL:1
ENST00000402796.5THADA-2032749408aaENSP00000385003.1
 
Nonsense mediated decay
-H7BYZ4 -TSL:5CDS 5' incomplete
ENST00000474159.6THADA-2151975348aaENSP00000445294.1
 
Nonsense mediated decay
-F5H3M9 -TSL:5
ENST00000485353.5THADA-217698No protein-
 
Processed transcript
---TSL:3
ENST00000436947.1THADA-210611No protein-
 
Processed transcript
---TSL:3
ENST00000486735.5THADA-218564No protein-
 
Processed transcript
---TSL:4
ENST00000473004.5THADA-214549No protein-
 
Processed transcript
---TSL:4
ENST00000469323.5THADA-213547No protein-
 
Processed transcript
---TSL:4
ENST00000462185.1THADA-211544No protein-
 
Processed transcript
---TSL:5
ENST00000497770.1THADA-219390No protein-
 
Processed transcript
---TSL:5
ENST00000467668.1THADA-212382No protein-
 
Processed transcript
---TSL:2
ENST00000485018.1THADA-216837No protein-
 
Retained intron
---TSL:3
Description

MUC20 overlapping transcript [Source:HGNC Symbol;Acc:HGNC:53807]

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000629807.2MUC20-OT1-319466No protein-
 
lncRNA
--Ensembl CanonicalTSL:5
ENST00000445430.5MUC20-OT1-2124208No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000445707.3MUC20-OT1-2132363No protein-
 
lncRNA
--GENCODE basicTSL:2
ENST00000429897.5MUC20-OT1-2072131No protein-
 
lncRNA
--TSL:2
ENST00000597482.5MUC20-OT1-2311476No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000453324.5MUC20-OT1-2191439No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000457233.5MUC20-OT1-2211279No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000627562.2MUC20-OT1-2931184No protein-
 
lncRNA
--TSL:5
ENST00000451982.6MUC20-OT1-2171161No protein-
 
lncRNA
--TSL:5
ENST00000631189.2MUC20-OT1-3361156No protein-
 
lncRNA
--TSL:5
ENST00000601955.5MUC20-OT1-2431123No protein-
 
lncRNA
--TSL:5
ENST00000600197.1MUC20-OT1-2381090No protein-
 
lncRNA
--TSL:5
ENST00000593988.2MUC20-OT1-2221072No protein-
 
lncRNA
--TSL:5
ENST00000626617.2MUC20-OT1-2741014No protein-
 
lncRNA
--TSL:5
ENST00000598992.5MUC20-OT1-2351005No protein-
 
lncRNA
--TSL:5
ENST00000627609.1MUC20-OT1-294992No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000625358.2MUC20-OT1-254962No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000608737.3MUC20-OT1-247956No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000630243.2MUC20-OT1-324955No protein-
 
lncRNA
--TSL:5
ENST00000594101.3MUC20-OT1-223955No protein-
 
lncRNA
--TSL:5
ENST00000630863.2MUC20-OT1-331954No protein-
 
lncRNA
--TSL:5
ENST00000626220.2MUC20-OT1-268932No protein-
 
lncRNA
--TSL:5
ENST00000627767.1MUC20-OT1-297929No protein-
 
lncRNA
--GENCODE basicTSL:2
ENST00000630417.2MUC20-OT1-327918No protein-
 
lncRNA
--TSL:5
ENST00000625776.2MUC20-OT1-259911No protein-
 
lncRNA
--TSL:5
ENST00000625632.2MUC20-OT1-257898No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000628547.2MUC20-OT1-308882No protein-
 
lncRNA
--TSL:5
ENST00000627502.2MUC20-OT1-290874No protein-
 
lncRNA
--TSL:5
ENST00000627555.2MUC20-OT1-292874No protein-
 
lncRNA
--TSL:5
ENST00000629823.2MUC20-OT1-320869No protein-
 
lncRNA
--TSL:5
ENST00000420851.6MUC20-OT1-204868No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000628439.2MUC20-OT1-306864No protein-
 
lncRNA
--TSL:5
ENST00000596584.4MUC20-OT1-229863No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000626569.2MUC20-OT1-272857No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000600527.5MUC20-OT1-241852No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000626870.2MUC20-OT1-278851No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000627471.2MUC20-OT1-289851No protein-
 
lncRNA
--TSL:5
ENST00000631087.1MUC20-OT1-334848No protein-
 
lncRNA
--TSL:5
ENST00000627152.2MUC20-OT1-285846No protein-
 
lncRNA
--TSL:5
ENST00000626007.2MUC20-OT1-263839No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000597871.1MUC20-OT1-233839No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000629990.1MUC20-OT1-321806No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000625338.1MUC20-OT1-253804No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000630830.1MUC20-OT1-330795No protein-
 
lncRNA
--TSL:5
ENST00000628668.2MUC20-OT1-310795No protein-
 
lncRNA
--TSL:5
ENST00000627863.2MUC20-OT1-298793No protein-
 
lncRNA
--TSL:5
ENST00000626089.2MUC20-OT1-264792No protein-
 
lncRNA
--TSL:5
ENST00000630197.2MUC20-OT1-323783No protein-
 
lncRNA
--TSL:5
ENST00000599448.5MUC20-OT1-236780No protein-
 
lncRNA
--TSL:5
ENST00000628392.2MUC20-OT1-305775No protein-
 
lncRNA
--TSL:5
ENST00000628301.2MUC20-OT1-304772No protein-
 
lncRNA
--TSL:5
ENST00000631288.2MUC20-OT1-338764No protein-
 
lncRNA
--TSL:5
ENST00000455807.2MUC20-OT1-220764No protein-
 
lncRNA
--TSL:3
ENST00000629721.2MUC20-OT1-318755No protein-
 
lncRNA
--TSL:5
ENST00000631366.2MUC20-OT1-342751No protein-
 
lncRNA
--TSL:5
ENST00000594976.5MUC20-OT1-226750No protein-
 
lncRNA
--TSL:5
ENST00000602127.5MUC20-OT1-244749No protein-
 
lncRNA
--TSL:5
ENST00000630663.1MUC20-OT1-328746No protein-
 
lncRNA
--TSL:5
ENST00000601648.5MUC20-OT1-242745No protein-
 
lncRNA
--TSL:3
ENST00000626969.2MUC20-OT1-281745No protein-
 
lncRNA
--TSL:5
ENST00000594446.5MUC20-OT1-224740No protein-
 
lncRNA
--TSL:5
ENST00000630874.2MUC20-OT1-332738No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000432601.3MUC20-OT1-210732No protein-
 
lncRNA
--TSL:5
ENST00000597034.5MUC20-OT1-230731No protein-
 
lncRNA
--TSL:5
ENST00000627363.2MUC20-OT1-288731No protein-
 
lncRNA
--TSL:5
ENST00000414625.6MUC20-OT1-201729No protein-
 
lncRNA
--TSL:5
ENST00000594715.5MUC20-OT1-225729No protein-
 
lncRNA
--TSL:5
ENST00000600288.5MUC20-OT1-239728No protein-
 
lncRNA
--TSL:5
ENST00000599566.5MUC20-OT1-237718No protein-
 
lncRNA
--TSL:5
ENST00000630387.2MUC20-OT1-325714No protein-
 
lncRNA
--TSL:5
ENST00000615493.4MUC20-OT1-250712No protein-
 
lncRNA
--TSL:5
ENST00000627297.2MUC20-OT1-286708No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000595086.5MUC20-OT1-227704No protein-
 
lncRNA
--TSL:5
ENST00000631105.2MUC20-OT1-335702No protein-
 
lncRNA
--TSL:5
ENST00000620737.3MUC20-OT1-252702No protein-
 
lncRNA
--TSL:5
ENST00000631359.2MUC20-OT1-341702No protein-
 
lncRNA
--TSL:5
ENST00000626979.2MUC20-OT1-282698No protein-
 
lncRNA
--TSL:5
ENST00000417704.5MUC20-OT1-202694No protein-
 
lncRNA
--TSL:3
ENST00000625824.2MUC20-OT1-260692No protein-
 
lncRNA
--TSL:5
ENST00000626156.1MUC20-OT1-266683No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000602175.5MUC20-OT1-245673No protein-
 
lncRNA
--TSL:5
ENST00000629686.2MUC20-OT1-317669No protein-
 
lncRNA
--TSL:5
ENST00000628125.2MUC20-OT1-302668No protein-
 
lncRNA
--TSL:5
ENST00000629537.2MUC20-OT1-316666No protein-
 
lncRNA
--TSL:5
ENST00000595382.5MUC20-OT1-228659No protein-
 
lncRNA
--TSL:5
ENST00000626346.2MUC20-OT1-270652No protein-
 
lncRNA
--TSL:5
ENST00000626872.2MUC20-OT1-279649No protein-
 
lncRNA
--TSL:5
ENST00000626233.2MUC20-OT1-269644No protein-
 
lncRNA
--TSL:5
ENST00000627512.2MUC20-OT1-291642No protein-
 
lncRNA
--TSL:5
ENST00000627993.2MUC20-OT1-299633No protein-
 
lncRNA
--TSL:5
ENST00000628823.2MUC20-OT1-312616No protein-
 
lncRNA
--TSL:5
ENST00000625971.2MUC20-OT1-262615No protein-
 
lncRNA
--TSL:5
ENST00000625383.2MUC20-OT1-255612No protein-
 
lncRNA
--TSL:5
ENST00000626706.1MUC20-OT1-276608No protein-
 
lncRNA
--TSL:5
ENST00000630675.2MUC20-OT1-329608No protein-
 
lncRNA
--TSL:5
ENST00000618708.3MUC20-OT1-251606No protein-
 
lncRNA
--TSL:5
ENST00000451228.5MUC20-OT1-216604No protein-
 
lncRNA
--TSL:3
ENST00000600382.5MUC20-OT1-240599No protein-
 
lncRNA
--TSL:5
ENST00000626904.2MUC20-OT1-280598No protein-
 
lncRNA
--TSL:5
ENST00000612098.4MUC20-OT1-248592No protein-
 
lncRNA
--TSL:5
ENST00000446521.1MUC20-OT1-214584No protein-
 
lncRNA
--TSL:4
ENST00000630170.2MUC20-OT1-322584No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000452844.5MUC20-OT1-218583No protein-
 
lncRNA
--GENCODE basicTSL:3
ENST00000628053.2MUC20-OT1-301582No protein-
 
lncRNA
--TSL:5
ENST00000597982.5MUC20-OT1-234579No protein-
 
lncRNA
--TSL:5
ENST00000597662.5MUC20-OT1-232570No protein-
 
lncRNA
--TSL:5
ENST00000630415.2MUC20-OT1-326560No protein-
 
lncRNA
--TSL:5
ENST00000628982.1MUC20-OT1-314554No protein-
 
lncRNA
--TSL:5
ENST00000628195.2MUC20-OT1-303552No protein-
 
lncRNA
--TSL:5
ENST00000626585.2MUC20-OT1-273544No protein-
 
lncRNA
--TSL:5
ENST00000420459.5MUC20-OT1-203543No protein-
 
lncRNA
--TSL:2
ENST00000628508.2MUC20-OT1-307542No protein-
 
lncRNA
--TSL:5
ENST00000425425.1MUC20-OT1-206525No protein-
 
lncRNA
--TSL:2
ENST00000438608.5MUC20-OT1-211525No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000631352.2MUC20-OT1-340523No protein-
 
lncRNA
--TSL:5
ENST00000626566.2MUC20-OT1-271521No protein-
 
lncRNA
--TSL:5
ENST00000627356.2MUC20-OT1-287519No protein-
 
lncRNA
--TSL:5
ENST00000628003.2MUC20-OT1-300511No protein-
 
lncRNA
--TSL:5
ENST00000626852.2MUC20-OT1-277511No protein-
 
lncRNA
--TSL:5
ENST00000627718.2MUC20-OT1-296510No protein-
 
lncRNA
--TSL:5
ENST00000631345.2MUC20-OT1-339507No protein-
 
lncRNA
--TSL:5
ENST00000432194.7MUC20-OT1-209503No protein-
 
lncRNA
--TSL:5
ENST00000627016.2MUC20-OT1-283503No protein-
 
lncRNA
--TSL:5
ENST00000625665.1MUC20-OT1-258496No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000628917.2MUC20-OT1-313490No protein-
 
lncRNA
--TSL:5
ENST00000431767.5MUC20-OT1-208486No protein-
 
lncRNA
--TSL:5
ENST00000625882.2MUC20-OT1-261484No protein-
 
lncRNA
--TSL:5
ENST00000615212.4MUC20-OT1-249473No protein-
 
lncRNA
--TSL:5
ENST00000625531.2MUC20-OT1-256468No protein-
 
lncRNA
--TSL:5
ENST00000628567.2MUC20-OT1-309463No protein-
 
lncRNA
--TSL:5
ENST00000627035.2MUC20-OT1-284458No protein-
 
lncRNA
--TSL:5
ENST00000631263.2MUC20-OT1-337455No protein-
 
lncRNA
--TSL:5
ENST00000631037.2MUC20-OT1-333451No protein-
 
lncRNA
--TSL:5
ENST00000424730.5MUC20-OT1-205431No protein-
 
lncRNA
--TSL:5
ENST00000628754.2MUC20-OT1-311430No protein-
 
lncRNA
--TSL:5
ENST00000608699.3MUC20-OT1-246415No protein-
 
lncRNA
--TSL:5
ENST00000627689.2MUC20-OT1-295409No protein-
 
lncRNA
--TSL:5
ENST00000451216.6MUC20-OT1-215405No protein-
 
lncRNA
--TSL:5
ENST00000629511.2MUC20-OT1-315393No protein-
 
lncRNA
--TSL:5
ENST00000626677.1MUC20-OT1-275378No protein-
 
lncRNA
--TSL:5
ENST00000626178.2MUC20-OT1-267342No protein-
 
lncRNA
--TSL:5
ENST00000626093.1MUC20-OT1-265229No protein-
 
lncRNA
--TSL:5
Description

cancer susceptibility 19 [Source:HGNC Symbol;Acc:HGNC:49476]

Gene Synonyms

CARLo-6, LINC01245

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000641965.1CASC19-2702329No protein-
 
Retained intron
---
ENST00000641584.1CASC19-2422114No protein-
 
Retained intron
---
ENST00000642088.1CASC19-2782091No protein-
 
Retained intron
---
ENST00000641392.2CASC19-2261855No protein-
 
Retained intron
---
ENST00000642082.1CASC19-2771545No protein-
 
Retained intron
---
ENST00000641582.1CASC19-2411421No protein-
 
Retained intron
---
ENST00000641510.1CASC19-2361384No protein-
 
Retained intron
---
ENST00000641919.1CASC19-2651172No protein-
 
Retained intron
---
ENST00000641514.1CASC19-2371074No protein-
 
Retained intron
---
ENST00000641073.1CASC19-2101065No protein-
 
Retained intron
---
ENST00000641262.1CASC19-219832No protein-
 
Retained intron
---
ENST00000521815.2CASC19-202561No protein-
 
Retained intron
--TSL:3
ENST00000642100.1CASC19-279656No protein-
 
lncRNA
--Ensembl Canonical
ENST00000500112.2CASC19-2015735No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000641365.1CASC19-2252219No protein-
 
lncRNA
---
ENST00000641701.1CASC19-2512204No protein-
 
lncRNA
---
ENST00000641001.1CASC19-2042055No protein-
 
lncRNA
--GENCODE basic
ENST00000641828.1CASC19-2602001No protein-
 
lncRNA
--GENCODE basic
ENST00000642142.1CASC19-2841868No protein-
 
lncRNA
--GENCODE basic
ENST00000641414.2CASC19-2281701No protein-
 
lncRNA
--GENCODE basic
ENST00000641853.1CASC19-2611638No protein-
 
lncRNA
--GENCODE basic
ENST00000641625.1CASC19-2461606No protein-
 
lncRNA
--GENCODE basic
ENST00000641523.2CASC19-2381601No protein-
 
lncRNA
--GENCODE basic
ENST00000642118.2CASC19-2811559No protein-
 
lncRNA
--GENCODE basic
ENST00000641588.1CASC19-2431546No protein-
 
lncRNA
--GENCODE basic
ENST00000641421.1CASC19-2301530No protein-
 
lncRNA
--GENCODE basic
ENST00000641218.2CASC19-2181525No protein-
 
lncRNA
--GENCODE basic
ENST00000641171.1CASC19-2141493No protein-
 
lncRNA
---
ENST00000642018.2CASC19-2741477No protein-
 
lncRNA
--GENCODE basic
ENST00000641719.1CASC19-2541443No protein-
 
lncRNA
---
ENST00000664744.1CASC19-2871431No protein-
 
lncRNA
--GENCODE basic
ENST00000641028.1CASC19-2061430No protein-
 
lncRNA
---
ENST00000641964.1CASC19-2691415No protein-
 
lncRNA
---
ENST00000641013.1CASC19-2051411No protein-
 
lncRNA
--GENCODE basic
ENST00000641309.2CASC19-2211405No protein-
 
lncRNA
--GENCODE basic
ENST00000641880.1CASC19-2631404No protein-
 
lncRNA
---
ENST00000641733.1CASC19-2551385No protein-
 
lncRNA
---
ENST00000641418.1CASC19-2291373No protein-
 
lncRNA
--GENCODE basic
ENST00000641674.2CASC19-2481365No protein-
 
lncRNA
---
ENST00000641991.1CASC19-2721360No protein-
 
lncRNA
---
ENST00000642102.1CASC19-2801351No protein-
 
lncRNA
--GENCODE basic
ENST00000641704.2CASC19-2521336No protein-
 
lncRNA
---
ENST00000641056.1CASC19-2081292No protein-
 
lncRNA
--GENCODE basic
ENST00000641153.2CASC19-2121290No protein-
 
lncRNA
--GENCODE basic
ENST00000641411.1CASC19-2271285No protein-
 
lncRNA
--GENCODE basic
ENST00000641604.1CASC19-2441251No protein-
 
lncRNA
--GENCODE basic
ENST00000641480.1CASC19-2321244No protein-
 
lncRNA
--GENCODE basic
ENST00000641106.2CASC19-2111207No protein-
 
lncRNA
---
ENST00000642126.1CASC19-2821206No protein-
 
lncRNA
--GENCODE basic
ENST00000641912.1CASC19-2641184No protein-
 
lncRNA
--GENCODE basic
ENST00000641321.1CASC19-2221173No protein-
 
lncRNA
--GENCODE basic
ENST00000641488.2CASC19-2341160No protein-
 
lncRNA
---
ENST00000641425.1CASC19-2311156No protein-
 
lncRNA
---
ENST00000641496.1CASC19-2351154No protein-
 
lncRNA
--GENCODE basic
ENST00000641362.1CASC19-2241146No protein-
 
lncRNA
---
ENST00000641179.1CASC19-2161140No protein-
 
lncRNA
---
ENST00000657669.1CASC19-2851127No protein-
 
lncRNA
--GENCODE basic
ENST00000641944.1CASC19-2671117No protein-
 
lncRNA
---
ENST00000641642.1CASC19-2471107No protein-
 
lncRNA
---
ENST00000641162.1CASC19-2131091No protein-
 
lncRNA
---
ENST00000641357.1CASC19-2231069No protein-
 
lncRNA
---
ENST00000641578.1CASC19-2401061No protein-
 
lncRNA
---
ENST00000641934.1CASC19-2661050No protein-
 
lncRNA
---
ENST00000641029.1CASC19-2071047No protein-
 
lncRNA
---
ENST00000642077.1CASC19-276993No protein-
 
lncRNA
---
ENST00000641298.1CASC19-220974No protein-
 
lncRNA
---
ENST00000641487.1CASC19-233966No protein-
 
lncRNA
---
ENST00000641746.2CASC19-256960No protein-
 
lncRNA
---
ENST00000641174.1CASC19-215959No protein-
 
lncRNA
---
ENST00000642010.1CASC19-273925No protein-
 
lncRNA
---
ENST00000641547.1CASC19-239915No protein-
 
lncRNA
---
ENST00000641696.1CASC19-250886No protein-
 
lncRNA
---
ENST00000641187.1CASC19-217875No protein-
 
lncRNA
---
ENST00000641681.1CASC19-249871No protein-
 
lncRNA
---
ENST00000642134.1CASC19-283870No protein-
 
lncRNA
---
ENST00000641867.1CASC19-262866No protein-
 
lncRNA
---
ENST00000663628.1CASC19-286863No protein-
 
lncRNA
---
ENST00000641794.1CASC19-258857No protein-
 
lncRNA
---
ENST00000641968.1CASC19-271842No protein-
 
lncRNA
---
ENST00000641706.1CASC19-253818No protein-
 
lncRNA
---
ENST00000641786.1CASC19-257816No protein-
 
lncRNA
--GENCODE basic
ENST00000641615.1CASC19-245770No protein-
 
lncRNA
---
ENST00000641060.1CASC19-209679No protein-
 
lncRNA
---
ENST00000523510.1CASC19-203575No protein-
 
lncRNA
--GENCODE basicTSL:3
ENST00000641953.1CASC19-268571No protein-
 
lncRNA
---
ENST00000641825.1CASC19-259356No protein-
 
lncRNA
---
ENST00000642076.1CASC19-275165No protein-
 
lncRNA
---
Statistics

Exons: 7, Coding exons: 0, Transcript length: 1,244 bps,

Version

ENST00000641480.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays

    HASH(0x28f8dca0)